Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0728 ATGCCCAGCTCGAGGCAATCCTTCTGCATCTCTTCTTCTTCTTCTTTGTTTTGTATCATTCTCTTCCACTCCATTTTTCTTCATGGCATAGCATTCTCTGCTAATCATGAAGTATCTCTTCTCTTCTCTTGGCTTCATAGCTCTCCTTCACCACCACCTCCATCTTTCTCCAACTGGAACATCCTTGACGCCAACCCATGCAATTGGACCTTCTTAACATGTTCTTCACAAGGTTTTGTCACTGAAATCAATATACAATCCGTCCCTCTAGAGCTTCCTTTGCCTTCAAATCTCTCTTCCTTTTCCCATCTTCAAACACTCGTCATTGCTGATGCCAATCTTACTGGAACCATCCCTATCAACATTGGTGACTGCTTTTCCCTCACTGTCATTGACCTGAACTCCAATAATCTTGTAGGGTCCATCCCTGCAAGTATAGGTAAGCTTCAGAACTTGGAGAGCTTGTCTCTGAACAGTAACCAGCTTACAGGAAAAATCCCAGTTGAGTTAGAAAACTGCATTAGCCTTAAAAGTATCCTCCTTTTTGATAACCAGCTAAGTGGTGTTATCCCATCTGAGATAGGGAAGTTGTCAAAACTTGAGATTCTTAGAGCAGGAGGAAACAAAGATTTAGAAGGGAAAATCCCTGAAGAGATTGGAGAATGCACCAATTTGACTGAACTGGGGCTTGCTGATACTGGTATATCAGGCTCATTGCCACCTTCATTGGGAAAACTGAGCAAGCTTCAAACTTTGTCCATCTACACTACAATGCTATCTGGTGAGATTCCAGCAGAGTTAGGTAACTGCTCTGAACTTGTTGATTTATTCCTATATGAAAATAGTCTATCTGGGTCTATTCCACCTGATCTGGGTAAGCTTCAAAAGCTGGAGCAATTGTTTTTATGGCAGAATAGTCTCATGGGAGCTATCCCAGAAGAGATTGGGAACTGCACAAGCTTGAAAAGAATTGATCTTTCTTTGAATTCTCTATCTGGCACTATACCTTTATCTTTTGGGGGTCTGTTAGAACTTGAGGAGTTCATGATAAGTGATAATAATGTTTCTGGGTCAATACCTGCAAGTCTTTCAAATGCCTCATTTCTGCAACAGTTGCAAGTTGACACAAATCAACTCTCAGGTTTGATTCCCCCAGAGCTTGGGAAGTTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTACTCTTGGAAATTGTAGTAACCTACAAGCCCTAGACTTGTCTCACAATGAACTTACTGGTAGCATTCCTCCTGGCCTATTTCAACTTCAAAACCTTTCAAAATTGCTCTTAATTTCTAATGATATTTCAGGTTCAATCCCATCAGAAATAGGCAGTTGTAGTTCTCTTATAAGACTGAGGCTTGGTAAGAATAGGATTACTGGTGGGATCCCTAAGACAATAGGGAGTCTCAAAAACCTGAACTTTTTAGACCTCAATGAGAATCATCTTTCTGGGCAAGTCCCAGATGAGATTGGCAACTGCACAGAACTGCAAATGATAGACTTCAGCAACAACAACTTAGAAGGTCCATTGCCTAATTCCTTGTCATCACTATCTTTGGTCCAAGTATTTGATGGATCTTCTAACAGATTCTCAGGTCAAATACCAGAAATTTTAGGCCGTCTTGTTTCAATGAATAAACTAATCCTGGGTAGAAACTTGCTTTCTGGACAAATTCCTGCATCACTGGGCCAATGTTCAAGTCTCCAAATGCTTGATCTTAGTGGCAATCAGCTCACAGGAAACATTCCACCAGAGCTTGGTCTTTTAGACACTCTTGAAATTGCTCTTAACCTGAGTTGCAATTCTCTAAGTGGCCCAGTTCCAGATCAGATTTCTGCTCTCACCAAGCTTTCTATGTTAGACGTTTCTCATAACCAGTTAGAGGGAAGTTTGAACTCACTTGCAGGGCTAGATAATCTTGTCTCTCTCAATATTTCGTACAACAATTTCACAGGTTATCTACCAGATAATAAGCTTTTTAGGCAATTATCTCCAAAGGACCTAACTGGGAATGAAGGGCTCTGCTCATCTGGTCAAGACTCATGCTTTGTGAGTGCTTCAAGCATGGCGCTGAATGGAAGTGAAGCGAGGAAGTCGCGAAGGACTAAGCTAGCTATCGGTTTGCTAGTAGTCTTAACAGTACTACTGACAATAATGGGGATAATTGCAGTGATAAAGGCAAGAAGAACCATTAGAGATGATGATTCAGAACTAGGGGACCCATGGCCATGGCAATTCATTCCATTCCAGAAGCTAAACTTTTCAGTGGAGCAGATATTGAGACGTTTAGTTGAAGGAAATATAATTGGAAAAGGATGTTCTGGTGTTGTTTATCGCGCTGAAATGGACGATGGTGAAGTCATTGCAGTGAAGAAACTGTGGCCTACAACAATGGATCATGTAGGAGGAGATGGATTCAAGGATGATAAAAGTGGAATTCGCGACTCATTCTCAACCGAGGTGAAAATGCTTGGCTCAATCCGTCATAAGAACATTGTTAGATTCTTGGGATGTTGTTGGAATAAAAACACAAGATTGCTGATATATGATTATATGGCGAATGGGAGTCTAAGTAGTCTACTTCATGAGAGAACAGGAAATTGTCTGGAATGGGAATTCAGATACAGAATCCTTTTAGGAGCTGCAGAAGGGCTTGCATATTTGCACCATGATTGTGTGCCTCCCATAGTTCATAGAGACATCAAAGCCAATAACATCCTCATTGGCATTGAATTTGAGCCTTATATTGCAGACTTTGGCTTGGCTAAGCTAGTTGATGATGGCGGCTTGGGTCGGTCTTCTAATACAGTGGCTGGTTCTTATGGATACATTGCTCCAGAATATGGCTACATGATGAAGATCACGGAGAAGAGCGATGTTTATAGCTATGGAGTAGTTATGTTGGAAGTCTTGACGGGCAAGCAACCGATAGATCCGACAATACCAGAGGGCCAACATGTTGTTGATTGGGTGAGGCAGAAAAGAGGGGTTGAAGTGCTTGATTCAAGCTTACTTTCAAGACCAGAATCAGAAATAGAGGAAATGATGCAAGCATTAGGCATAGCCTTGTTGTGTGTAAACTCATCCCCAGATGAGAGACCAACAATGAAAGATGTTGCAGCAATGCTAAAAGAAATCAAACAAGAAAGAGAAGAATATGCAAAAGTTGATGCACTCTTAAAGGGATCTCCTGCAAATGATCATCACGTCAAAGCAACATCTTCATCATTGACAGTGCAAGCAGTGCAAAATTTGTACCCAGAAGGCAATAATCATACGATCTTCTCTGTATCTTCACTGCTTTATTCATCATCTTCTTCCAGTGCCAAAGTGGATTTTCTTTCTGCTTCACCTTCTCCATCTCTAATGGCCGAAGCTTCCGCCAAACCGGTGCCCGTTTTGAAAGATGAGCTCGACATCGTGATCCCCACGATCCGAAACCTCGATTTCTTGGAGATGTGGCGTCCATTTTTCCAGCCTTATCACTTGATCATAGTCCAAGACGGTGACCCTTCTAAGACCATTAAGGTCCCCGAAGGTTTCGACTATGAGCTCTTCAATCGGAATGATATCAACAGGATCTTGGGTCCTAAGGCCTCTTGCATTTCCTTCAAGGACTCTGCATGTCGCTGCTTTGGCTTCATGGTCTCTAAGAAGAAGTACATCTTCACCATTGACGATGATTGCTTTGTTGCAAAAGACCCATCTGGCAAAGATATCAATGCACTTGAGCAACACATCAAGAATCTCCTAACTCCATCAACTCCATACTTTTTCAATACGCTTTATGATCCTTACAGAGAAGGCACTGACTTTGTCCGGGGCTACCCTTTTAGTCTTCGTGAAGGTGCCCCAACGGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGACTATGATGCTCCAACACAGCTTGTGAAGCCTCATGAGAGGAATACTAGGTATGTTGATGCTGTGTTGACCGTACCCAAAGGAACCTTGTTTCCCATGTGTGGTATGAATCTGGCATTCAACCGCGAGCTGATCGGACCAGCAATGTATTTTGGACTGATGGGGGATGGCCAACCTATTGGACGATATGATGATATGTGGGCTGGCTGGTGCATGAAGGTGATCTGTGACCATCTGGGCTTGGGGGTGAAGACTGGTTTGCCATACATATGGCACAGCAAAGCAAGCAATCCATTTGTGAATCTGAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGAGATCATTCCCTTCTTCCAATCTGCTACGCTTCCCAAAGAATGCTCCAGTGTTCAGAACTGCTACATTGAGCTCTCCAAGCAGGTCAAGGAAAAGCTCGGCACCATTGATCCCTACTTCATCAAGCTAGCAGACGCCATGGTCACCTGGATTGAAGCTTGGGATGAACTTAATGGCACAGCCAAGTGA 4470 0.4262 MPSSRQSFCISSSSSLFCIILFHSIFLHGIAFSANHEVSLLFSWLHSSPSPPPPSFSNWNILDANPCNWTFLTCSSQGFVTEINIQSVPLELPLPSNLSSFSHLQTLVIADANLTGTIPINIGDCFSLTVIDLNSNNLVGSIPASIGKLQNLESLSLNSNQLTGKIPVELENCISLKSILLFDNQLSGVIPSEIGKLSKLEILRAGGNKDLEGKIPEEIGECTNLTELGLADTGISGSLPPSLGKLSKLQTLSIYTTMLSGEIPAELGNCSELVDLFLYENSLSGSIPPDLGKLQKLEQLFLWQNSLMGAIPEEIGNCTSLKRIDLSLNSLSGTIPLSFGGLLELEEFMISDNNVSGSIPASLSNASFLQQLQVDTNQLSGLIPPELGKLSKLTVFFAWQNQLEGSIPSTLGNCSNLQALDLSHNELTGSIPPGLFQLQNLSKLLLISNDISGSIPSEIGSCSSLIRLRLGKNRITGGIPKTIGSLKNLNFLDLNENHLSGQVPDEIGNCTELQMIDFSNNNLEGPLPNSLSSLSLVQVFDGSSNRFSGQIPEILGRLVSMNKLILGRNLLSGQIPASLGQCSSLQMLDLSGNQLTGNIPPELGLLDTLEIALNLSCNSLSGPVPDQISALTKLSMLDVSHNQLEGSLNSLAGLDNLVSLNISYNNFTGYLPDNKLFRQLSPKDLTGNEGLCSSGQDSCFVSASSMALNGSEARKSRRTKLAIGLLVVLTVLLTIMGIIAVIKARRTIRDDDSELGDPWPWQFIPFQKLNFSVEQILRRLVEGNIIGKGCSGVVYRAEMDDGEVIAVKKLWPTTMDHVGGDGFKDDKSGIRDSFSTEVKMLGSIRHKNIVRFLGCCWNKNTRLLIYDYMANGSLSSLLHERTGNCLEWEFRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGIEFEPYIADFGLAKLVDDGGLGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVMLEVLTGKQPIDPTIPEGQHVVDWVRQKRGVEVLDSSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMKDVAAMLKEIKQEREEYAKVDALLKGSPANDHHVKATSSSLTVQAVQNLYPEGNNHTIFSVSSLLYSSSSSSAKVDFLSASPSPSLMAEASAKPVPVLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPEGFDYELFNRNDINRILGPKASCISFKDSACRCFGFMVSKKKYIFTIDDDCFVAKDPSGKDINALEQHIKNLLTPSTPYFFNTLYDPYREGTDFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYVDAVLTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLPKECSSVQNCYIELSKQVKEKLGTIDPYFIKLADAMVTWIEAWDELNGTAK 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0728 1489 FunFam Putative LRR receptor-like serine/threonine-protein kinase 612 697 - -
Lele54g0728 1489 SUPERFAMILY L domain-like 40 395 - -
Lele54g0728 1489 ProSiteProfiles Protein kinase domain profile. 780 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0728 1489 Coils Coil 1053 1073 - -
Lele54g0728 1489 SMART serkin_6 780 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0728 1489 ProSitePatterns Protein kinases ATP-binding region signature. 786 809 IPR017441 GO:0005524
Lele54g0728 1489 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1175 1386 IPR029044 -
Lele54g0728 1489 SMART LRR_typ_2 486 510 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 558 582 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 583 606 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 631 653 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 149 173 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 414 438 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 294 318 IPR003591 -
Lele54g0728 1489 SMART LRR_typ_2 654 679 IPR003591 -
Lele54g0728 1489 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Lele54g0728 1489 Gene3D Phosphorylase Kinase; domain 1 766 868 - -
Lele54g0728 1489 Gene3D Transferase(Phosphotransferase) domain 1 869 1080 - -
Lele54g0728 1489 Pfam Protein tyrosine and serine/threonine kinase 783 1059 IPR001245 GO:0004672|GO:0006468
Lele54g0728 1489 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 763 868 - -
Lele54g0728 1489 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 209 432 - -
Lele54g0728 1489 PRINTS Leucine-rich repeat signature 631 644 - -
Lele54g0728 1489 PRINTS Leucine-rich repeat signature 417 430 - -
Lele54g0728 1489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 430 526 IPR032675 -
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 228 333 IPR032675 -
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 334 429 IPR032675 -
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 527 611 IPR032675 -
Lele54g0728 1489 SUPERFAMILY RNI-like 276 657 - -
Lele54g0728 1489 PANTHER RECEPTOR-LIKE PROTEIN 55 492 1065 - -
Lele54g0728 1489 SMART LRR_sd22_2 510 536 - -
Lele54g0728 1489 SMART LRR_sd22_2 631 656 - -
Lele54g0728 1489 SMART LRR_sd22_2 149 172 - -
Lele54g0728 1489 SMART LRR_sd22_2 414 443 - -
Lele54g0728 1489 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 869 1078 - -
Lele54g0728 1489 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 433 527 - -
Lele54g0728 1489 FunFam LRR receptor-like serine/threonine-protein kinase 532 607 - -
Lele54g0728 1489 ProSiteProfiles Leucine-rich repeat profile. 584 606 IPR001611 GO:0005515
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 149 227 IPR032675 -
Lele54g0728 1489 FunFam Nuclear pore complex protein NUP107 34 189 - -
Lele54g0728 1489 Pfam Reversibly glycosylated polypeptide 1151 1485 IPR037595 -
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Lele54g0728 1489 SUPERFAMILY Protein kinase-like (PK-like) 757 1060 IPR011009 -
Lele54g0728 1489 Gene3D Ribonuclease Inhibitor 612 705 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0728 Lele-ChrLele54 14217139 14225545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0728 32 1079 Receptor kinase-like Gene Family AT5G56040 48.260 0.0 958
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele54g0728 RGP 8e-178 CL0110