Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0727 ATGATGGCATATTCATCTTTACTAATGGAATCTTGGAGTAATGCCTCAGAAGAGAAACGCTATTTGTTTTCTGATGAAATGGATTTCTCGCTGGATGCTTATATGAGAAGTAGAAGAGCAATGGTTGAATGGGACAATAATAAAGCCTCTTCTTATATCTTTGAGAAAGATGGGTTTATTTCAGATAAAGAGGTAATTAAAAGCTTTGAGTTTGTGGATTTAGGGTTTCCTGATTTGTTCAAAAGGCCTGTTCATGGTAGCCAGCCACCACTGGAAGCATCAAACTATGAACAAGACAGTGATTCTAGTACGAAAGTTAATTCCTCTACTCATGTTATTGCTCTGAATTCACCTTTGGGAAAAGTAGAATCTGAGTCAAGGCATTCATTTTCTCTAGTTGAATCTAAGATTCATGATTCTTCACTGATTGATTTAAAGCTAGGGAGATTAGGAGATTGTAAAGATGCAAGTAGTGATAAAAATGACAATGAGGGGTTCGCTTTTCAACCTATGTATCCGGTGTCGGCACTTACAAAGAGAGCTCGAACTTCTTCCAGCTTACCTACTCAAACACGTGTTTGTCAAGTTAATGGTTGTCACAAGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTTCATTCGAAGACAGCCAAAGTTTTTGTTAATGGCATGGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTGCTAGCTGAGTTTGATGATGGCAAGCGCAGTTGTCGTAGACGCCTAGCTGGACACAATGAACGTCGAAGGAAGCCTCAGTTTGATTACATGTCTGGTAAACCACATAAGATACTGCAGTCGTGTCAAGGTACCAAATATTTTGAGGCTTCATTACAGAAGAGACCCCAATTTGCCTTTCACAATGTGTTTCAAGGTGGCGTTTTTTACGCAGGAAAGTATGAACAAAGCAATCATCAGATTGGACACATCAAGTTGGAAGATGAATCAATTTACAGTTCTCAATTAGCAAATGGTCAAGAGTTATCCAGGGCCTCCAACTCCAGAAGTTGTGCTCTCTCTCTTCTGTCAGCTCAGTCACAGGATCTAACAACACGCTGCTCGGCTGGTTCCCTTATTTCTCAAGGCATCTGCTCACAGCAGAGTGATGGCCAAGTTTCTGAAACACCTTTTGGTATAAGCTTTCTGGATAAAAATGTCCCAAGTCAGTCCTTTTCATGTGAGATAAACTCCATGGAAGTTACCAAGAACAGACCCATAATGCCTTCTGATGTTGTTGGCCATGCTCTTCAACTTGAAGTACATGGAGATGATGATACTTACAAACCATCAGATCTGTTAAATTCCAAATATCATCCTCCTGTTGAACATAGCTCCACCATTGATCTGTTCCAATTGTCATCCCATCTTCAAAGGGTGGAGCAGCAAAGAAATTCTGTTCCAGTGAAGCACGAAAACGAGGATGGCTGCCTTATCCCAACCATGTGA 1494 0.407 MMAYSSLLMESWSNASEEKRYLFSDEMDFSLDAYMRSRRAMVEWDNNKASSYIFEKDGFISDKEVIKSFEFVDLGFPDLFKRPVHGSQPPLEASNYEQDSDSSTKVNSSTHVIALNSPLGKVESESRHSFSLVESKIHDSSLIDLKLGRLGDCKDASSDKNDNEGFAFQPMYPVSALTKRARTSSSLPTQTRVCQVNGCHKDLSSSKEYHKRHKVCDVHSKTAKVFVNGMEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYMSGKPHKILQSCQGTKYFEASLQKRPQFAFHNVFQGGVFYAGKYEQSNHQIGHIKLEDESIYSSQLANGQELSRASNSRSCALSLLSAQSQDLTTRCSAGSLISQGICSQQSDGQVSETPFGISFLDKNVPSQSFSCEINSMEVTKNRPIMPSDVVGHALQLEVHGDDDTYKPSDLLNSKYHPPVEHSSTIDLFQLSSHLQRVEQQRNSVPVKHENEDGCLIPTM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0727 497 Pfam SBP domain 194 267 IPR004333 GO:0003677
Lele54g0727 497 MobiDBLite consensus disorder prediction 87 108 - -
Lele54g0727 497 MobiDBLite consensus disorder prediction 478 497 - -
Lele54g0727 497 ProSiteProfiles Zinc finger SBP-type profile. 191 268 IPR004333 GO:0003677
Lele54g0727 497 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 147 379 IPR044817 GO:0003677
Lele54g0727 497 MobiDBLite consensus disorder prediction 91 108 - -
Lele54g0727 497 FunFam Squamosa promoter-binding-like protein 14 185 255 - -
Lele54g0727 497 Gene3D - 185 255 IPR036893 GO:0003677|GO:0005634
Lele54g0727 497 SUPERFAMILY SBT domain 193 273 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0727 Lele-ChrLele54 14205106 14210257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0727 143 480 SBP-box Gene Family AT1G69170 39.710 1.14e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele54g0727 SBP 1.2e-30 No_clan