Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0722 ATGATTGGAAAAGGTGTGTTAGGAGAGCGCTTTCAACCTCGGACATGTTCTGGGAATAGTGCACCCAAAACTGGTCAGGCAAAAGAGTATTCCAAAAATGTTGTTATTGACATAGATGGTGATCAAGTTGATGACGTGGTAATCATAGATTTTCCCGATTTTGTGCAACAAAAGTCACATGGCTCTAGTGTGCAGAGTAGAGACAGAAAGTGTCCGCTTCAGAGTGTCATCAGCATTGATGATGATGATGATGAGAGCGATGAAGCAGACCACACTGAAATTATTGCAGAAGGTGGTGAGGAATTGGATAGTGATGCCTCCTCAAGCAAAAGATTTTCTCCTGTTCCAGGCTTTACGGGAAATTCTATACATCTAGATAATGATGACTATCCTGTTACCTTTGAAAAAGGTTCTCCATCTAAATTGCCAGAAAGTAGGAAATCAAGCTCTGCACAAGCTGCTGACAGAAATCGATATGGTTTAGATTCCTCTGAAAGTGAATCATCCGAGAGTGATTGTTCTGACTGTGAACTTATGGAAGTTTGCGAACAATGGGAAAAGGCTTCTCAAAGAAGACGCAATATCTTTAATGATCGACCTCGTTTTGATGAGCAGGCCAGTTCTTCTGGTTTGCATAGTAATTCTAATGCTGATATCGAAATGGAAAATAGGACAGGACAGGATGCAGGAACTTCCTTATATTCTGGTCCCAGCAATGGTAAATGTGCGATGAACCTAGCCCATACGGTTAACAACCAAACAGATGATGTTGATCCCAATGTGGGGAAAGAACATCCTTGTAAAGATTTTGATAAGAAAATTGACCAAGAGAGTTCTATATACCAGAGATCTGATTCTCTGTGTGAAGAAACAACAAGGAGTGAAGAATTCTGCCATTTCTCCAAACATAATGGTTTTAATGTAGCTAGTGAGTTCAATAAAGATGCCGGTGATAAAGATTCTAAATTTATGAGCTCTACCCAAGAAGAAAGCAAAAGACAAATTGAGAGTGATGGATCTGGATTAAGGAACAGGGATGCCAATTTTCCCGACACACATTCTACCTGTGCCTCTTTTGATGAAATACAACTTAACCAGGATGGGCCTGTTTCTCAAGAATGTGATGCGAGGGATATAATTAATGAAAGAGAAAAACTTAAGGAAACTGATGAATATAAGCAAGCCATTGAAGAGGAATGGGCATCCAGGCAACGACAATTGCAAATTCAGGCAGAGGAGGCACAAAGGTTGCGTAAAAGAAAAAAGGCTGACAGTAAGCGCTTATTGGATATGCAAAGAAGGCAAAAGGAACGGATTGAAGAAGTCAGAGAGACTCAGAAGAAGGATGAGGAACATATGAACATTAAAGAGCAACTGCGGATTGAAATAAGGAAAGAGCTTAATAAATTGGAGATAACATGCGTTGACATGGCTTCATTGCTTCGTGGCTTAGGAATACAAGTGGGCGGAGGCTTTAGCCCCTTGCCACAAGAGGTGCATGCTGCTTATAAACGGGCCTTGCTGAGGTTTCATCCGGATCGGGCATCGAAAACTGACATTCGACAGCAGGTGGAGGCTGAGGAGAAGTTCAAGCTCATCTCTCGAATGAAGGAGAAATTTTTGACAACTTCATGTTTCTGA 1641 0.4119 MIGKGVLGERFQPRTCSGNSAPKTGQAKEYSKNVVIDIDGDQVDDVVIIDFPDFVQQKSHGSSVQSRDRKCPLQSVISIDDDDDESDEADHTEIIAEGGEELDSDASSSKRFSPVPGFTGNSIHLDNDDYPVTFEKGSPSKLPESRKSSSAQAADRNRYGLDSSESESSESDCSDCELMEVCEQWEKASQRRRNIFNDRPRFDEQASSSGLHSNSNADIEMENRTGQDAGTSLYSGPSNGKCAMNLAHTVNNQTDDVDPNVGKEHPCKDFDKKIDQESSIYQRSDSLCEETTRSEEFCHFSKHNGFNVASEFNKDAGDKDSKFMSSTQEESKRQIESDGSGLRNRDANFPDTHSTCASFDEIQLNQDGPVSQECDARDIINEREKLKETDEYKQAIEEEWASRQRQLQIQAEEAQRLRKRKKADSKRLLDMQRRQKERIEEVRETQKKDEEHMNIKEQLRIEIRKELNKLEITCVDMASLLRGLGIQVGGGFSPLPQEVHAAYKRALLRFHPDRASKTDIRQQVEAEEKFKLISRMKEKFLTTSCF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0722 546 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 543 - -
Lele54g0722 546 SUPERFAMILY Chaperone J-domain 437 538 IPR036869 -
Lele54g0722 546 MobiDBLite consensus disorder prediction 312 352 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 97 175 - -
Lele54g0722 546 Coils Coil 404 424 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 1 27 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 143 159 - -
Lele54g0722 546 Coils Coil 429 449 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 13 27 - -
Lele54g0722 546 ProSiteProfiles dnaJ domain profile. 479 546 IPR001623 -
Lele54g0722 546 MobiDBLite consensus disorder prediction 197 217 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 313 340 - -
Lele54g0722 546 CDD DnaJ 496 534 IPR001623 -
Lele54g0722 546 Gene3D DnaJ domain 495 540 IPR036869 -
Lele54g0722 546 Coils Coil 379 399 - -
Lele54g0722 546 MobiDBLite consensus disorder prediction 201 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0722 Lele-ChrLele54 14153978 14156522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0722 54 14153978 14156522 Lele55g0768 55 5138890 5141549 hybridization
Lele54g0722 54 14153978 14156522 Lele56g0712 56 5349640 5352179 hybridization