Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0706 ATGGGTATCTTTCTCTTCCCGCTTTTAGCTGGGTATTTCTTTCTCTCTCTCTCTTTTTCAGAGTTGGGTTCTTGGTTAGCTTTGGAAATGGTAGCTGCCAAAGTCGTACTTCGACAAGTCGTCTCGTTCTTTCATTTTCAAGAGAACTGAATCATAAAAAAGACTCGGTGTACTTGTTCAGGAGAGTTGGATATGTCTGACAAAGAAAATTTTGAGATAGATAGAAACGTGGATCATGTGAGTTATTCATCTAGTATGCCCTCGGATTGGAGATTTGGGGTTCCTAATCTTGCAAATACATCAGTGGGTTTGGGGGATTCATATGTTCCAAGCTTCTGGGATCATCCTATCAGTTCCCAAAACTTGAGCTCACATGACATCAATGTGCAGCAGAACAATGGTAGTTCCTCAAGCTCAATTGGAAATAGAAAAGATGGCCTTGCCTTAGCTGGTCATTATAGAACACTTGAAATGGGTTGGAACCCAACAAGTTCTATTTTAAAAGGGGATGCTGCTTTCTTACCAAACAGACCAACAATCTTCCCGCAGAGTTTGTCTCAGATTCCCACTGATTCTGCCTTTATTGAGCGAGCTGCAAGATTCTCATGCTTCAGTCAGTTCAATGGAGGGAATTTTGGTAGTATGATGAACTCATTTGGTATTCCTCAATCCATGATGGGTCTGTATGCTGGACGGGATGTTCTTGCAGGCCATGGCTTAAAATCAGCTCATGGAGCAGAACGATCTGAAGAAAGTGCTCAGGATGTTGAAGGTGAAGCTGCAACAGATGTGTCTGTGTCCCCATCTTCTGTTCAGAATTTGGCCACTAAAGGAAGTCCACTCAAGAATGACAAGAGAAGTGAAAGCCTAGTGACATCTCAAGATGAAGCAAAACAGGCTCTTGGGAGGTCTACTAATAATGAGTCTGATAGAGCCGAATCAAGTGTTGGTGGTGATGATGATGATGATGCTGGTGGTCAAAATGATATGCCTATGTTGGAGGGTACAAGTGGGGAGCCTTCTAACAAAGGACTAAACGCAAAGAAAAGGAAAAGAAGTGGGAAGGATTCTGATAATGAAAAAGTCAATGGAGGTTCTGAACCACCAAGTGAGGCTGCAATGGAGAATTCTGAGAGCCGACAGAAGGGCGACCAACAACCAACTTCAACAACCAAGACTTCTGGGAAGAATACCAAACAGGGGTCTCAAGCTTCTGATCCACCAAAGGAGGAATACATACATGTTAGGGCTCGCAGGGGTCAAGCAACGAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAAAGGATGAAATTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTGACTGGCAAGGCGGTTATGCTAGATGAAATCATTAACTATGTACAGTCACTCCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACTGTAAATTCACGGCTGGATTTTAATCTTGAAGGACTTATTGCCAAAGATATGCTTCAGCAACGGCCTGGCCCCTCATCTGCATTGAGGTTTTCTCCAGAAATGCCTATGGTTTTTCCGACTCTACATCCATCTCAACCAGGCCTTCTAAAGTCAAATATTCCTGGCATAGCGAACTCATCTGATATACTTCGAAGAACCATTCATCAACAGTTAACTCCTGTGGTTGGAGGATTCAAGGATCCTAATCAGCTACCTGAGATGTGGGAGGATGAACTGCACAATGTTGTACAGATGAGCTATGCACCAACTGCTCCACCGAGTAGTCAAGACGATGATGGCAATGCAACAGCAAGTAAGATGAAGAATACTTCCAAAATAAAAGGAGAAAGAGAAGCATCAGAAGGAGAGGGAAAAGGAGAAGCATTCATGACGATGGTTCATCAGAACACTCAGAACGATTCAAGAAGAAAGAATGTGCTTGTTGATGAGCAATTTCCTCTGCTAGTGAATGAGAAAGATGAAGGTGGTTCTCAGGGGGCGTCTTTTAGTGGGTCAGTGTTCAATTTATCTACCACCATTATTGGAGCTGGAATTATGGCCTTACCTGCTGCCATGAAAGTTCTGGGTTTGGGTTTGGGAATTATCGCCATAGTCTTTCTTGCGTTGCTCACGGAGACTTCCTTAGAGATTCTGATAAGATTTAGCAGAGTAGGAAAGGCTGAGACCTATGGGGAAGTAATGCGTTATGCCTTTGGAATTGTTGGAAGATGGGCTTTTCAGATATGCGTTCTTCTCAACAATTTTGGGATTCTCGTCGTCTACATGATCATAATTGGTGATGTGCTATCTGGAACATCTTCAAGTGGAACTCATCATGCTGGTGTATTGGAAGGATGGTTTGGCGAATGCTGGTGGACTGGGCGTACTTTTATTCTCCTGGTAGCAACCCTATTTGTATTTGCTCCTTTGGCATTCTTCAAGCGGATAGATTCTTTGAGATATTCTTCCGCTTTAGCAGTGGCACTGGCAATTGTGTTTATAGTCATAACGGCAGGGATAACATTTATAAAACTGTTCAATGGTAGCATTACCAGACCCAGGTTGCTACCTAATGTTACTGATTTTACATCTGCATGGAAGCTCTTTACAGCAACCCCTGTCCTTGTGACAGCATTTGTCTGCCATTACAATGTGCATACAATAGACAATGAGCTAGAAGACTCTTCCATGATACAAAAAGTTGTACGTGCATCTCTGGTTCTATGTTCCAGCGTCTATATATTTACGGCCTTATTCGGGTTTCTTTTGTTTGGTGAATCAACTCTTGATGATGTTCTGGCCAACTTTGATACCGACCTTGGCATCCCTTACGGCAACCTGCTCAATGACATCGTTCGCCTCAGTTATGCCCTCCATCTTATGCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGGTTTTATTTTGGTGATTTACTTTTCCCTTCAGCTAGATCAATGGATTTAGATAATGTTAAGTTTGTGTTGACCACAACTGGACTCATCTCTTTTATATATGTGGCGGCAAATTTTATACCTAGCATTTGGGATACTTTCCAGTTCACTGGAGCAACTGCTACTGTTTGCCTAGGGTTCATTTTTCCTGCTGCAATTGCTCTAAGGGATCCTAATGGTATTGCAACAAAGAAAGATAAGGTTTTATCTGTTGTCATGATTGTGCTGGCTGTGTCCTCAAATGTGGTGGCCATATACAGTAATGCCAATGCTATCTTTAGTAAAAATAAATGA 3237 0.4254 MGIFLFPLLAGYFFLSLSFSELGSWLALEMVAAKVVLRQVVSFFHFQENXIIKKTRCTCSGELDMSDKENFEIDRNVDHVSYSSSMPSDWRFGVPNLANTSVGLGDSYVPSFWDHPISSQNLSSHDINVQQNNGSSSSSIGNRKDGLALAGHYRTLEMGWNPTSSILKGDAAFLPNRPTIFPQSLSQIPTDSAFIERAARFSCFSQFNGGNFGSMMNSFGIPQSMMGLYAGRDVLAGHGLKSAHGAERSEESAQDVEGEAATDVSVSPSSVQNLATKGSPLKNDKRSESLVTSQDEAKQALGRSTNNESDRAESSVGGDDDDDAGGQNDMPMLEGTSGEPSNKGLNAKKRKRSGKDSDNEKVNGGSEPPSEAAMENSESRQKGDQQPTSTTKTSGKNTKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFNLEGLIAKDMLQQRPGPSSALRFSPEMPMVFPTLHPSQPGLLKSNIPGIANSSDILRRTIHQQLTPVVGGFKDPNQLPEMWEDELHNVVQMSYAPTAPPSSQDDDGNATASKMKNTSKIKGEREASEGEGKGEAFMTMVHQNTQNDSRRKNVLVDEQFPLLVNEKDEGGSQGASFSGSVFNLSTTIIGAGIMALPAAMKVLGLGLGIIAIVFLALLTETSLEILIRFSRVGKAETYGEVMRYAFGIVGRWAFQICVLLNNFGILVVYMIIIGDVLSGTSSSGTHHAGVLEGWFGECWWTGRTFILLVATLFVFAPLAFFKRIDSLRYSSALAVALAIVFIVITAGITFIKLFNGSITRPRLLPNVTDFTSAWKLFTATPVLVTAFVCHYNVHTIDNELEDSSMIQKVVRASLVLCSSVYIFTALFGFLLFGESTLDDVLANFDTDLGIPYGNLLNDIVRLSYALHLMLVFPVIFFSLRFYFGDLLFPSARSMDLDNVKFVLTTTGLISFIYVAANFIPSIWDTFQFTGATATVCLGFIFPAAIALRDPNGIATKKDKVLSVVMIVLAVSSNVVAIYSNANAIFSKNK 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0706 1078 Gene3D - 418 493 IPR036638 GO:0046983
Lele54g0706 1078 Coils Coil 468 488 - -
Lele54g0706 1078 MobiDBLite consensus disorder prediction 607 621 - -
Lele54g0706 1078 Pfam Helix-loop-helix DNA-binding domain 424 472 IPR011598 GO:0046983
Lele54g0706 1078 MobiDBLite consensus disorder prediction 584 606 - -
Lele54g0706 1078 MobiDBLite consensus disorder prediction 241 430 - -
Lele54g0706 1078 CDD bHLH_AtBPE_like 411 496 - -
Lele54g0706 1078 MobiDBLite consensus disorder prediction 582 623 - -
Lele54g0706 1078 PANTHER AMINO ACID TRANSPORTER 657 1060 - -
Lele54g0706 1078 MobiDBLite consensus disorder prediction 370 405 - -
Lele54g0706 1078 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 421 471 IPR011598 GO:0046983
Lele54g0706 1078 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 419 490 IPR036638 GO:0046983
Lele54g0706 1078 SMART finulus 427 477 IPR011598 GO:0046983
Lele54g0706 1078 MobiDBLite consensus disorder prediction 293 312 - -
Lele54g0706 1078 MobiDBLite consensus disorder prediction 263 280 - -
Lele54g0706 1078 FunFam Basic helix-loop-helix transcription factor 418 490 - -
Lele54g0706 1078 Pfam Transmembrane amino acid transporter protein 664 1070 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0706 Lele-ChrLele54 14014514 14024151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0706 662 1077 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.587 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele54g0706 Aa_trans 5.4e-59 CL0062