Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0699 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGCTCCCTGGTCTATTGAAAGATCAAGTTTGCTTGGTTAAAAGGAAAGACTCTGATGGCTATAAGATTGCTCCAATCCAAGATCAGCTATCATTTGAGAAGGGTTTTTTTGTAGTAATCCGTGCATGCCAGTTGTTGTCCAAAAATAATGATGGAATAATATTGGTAGGGTTGGCTGGTCCTTCGGGGGCTGGGAAGACTGTATTCACTGACAAAATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACGGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGTTCAGGTTCCAATCTATGATTTCAAGTCCAGTTCTCGTATAGGATACAGGACAGTCGAAGTCCCGAGCTCCCGAATTGTGATCATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGACCTCTGCTGGACCTTCGTATATCTGTTACAGGTGGAGTTCATTTTGACCTGGTCAAGCGAGTTATACGAGACATTCAACGTGCTGGTCAACAACCTGCAGAAATCATTCATCAAATATCTGAGACGGTATTTCCAATGTACAAGGTCTTTATCGAGCAAGATCTGCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTGAAATCAGCAAGGAATGTGACAGTTGAACAAATTAAAGCTGTCTTCTCTGAAAATTTTAAGGAAACAAATGAGCAGATTTATGATATATATCTTCTACCGCCGGGTGAAGATCAAGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGGAAATACTGTCTAATGTTTGAGGAATGGGTCACAGATATTCCATTTGTCATCTCACCAAGAATATCTTTTGAGGTTAGTGTGCGGCTCCTTGGTGGCCTGATGGCCCTGGGATACACGATAGCTTCCATTCTAAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTCTCTGTGAAACTAGATTGGCTTTTGCAACTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGCTCTATTGTAAGATGCATAGCCCAGCAGCTCGGCATGGAAGGTTCCTATATTGCTCGTACCTACATTGAGCAAATACAACAGGAAAAGATTTTAGATGAGGTTATGGCCCTTCCAGACGATTTAAAAACAAAGCTTGGCCTAGATGAGGATATGGTGTCTAGCCCAAAAGAAGCACTTTCTAAAGCCTTTGCAGATAGGGTTCCTGCGAGAAAAATGCACATGAGTGGTATGTCCCAGTCGTATACAAGCCAAAGGGACAAAAATCTACTCAAACATACCCGATATGGTGCCGGCAACAAAGGGTTTGGTGAAAGAAATCCGGATTCTTCCATAGCGCTAACAAATGAGCTTTCAGAACAAATTTCTTCTCTCAATGAAAGAATGGATGAGTTTACAAGTCGTATTGAAGAGCTGAATTCCAAGTTAATTATCAATAAAAATTCTCCAAGCCAACAAACCACAACACTCCAATCTGAAGCCTGCAATGGTTCTGCTCCCACCTCTCACTTCATTACTAGTTTGGAAAGTGGTTCTCTAACTGGATCTCTTATGAAGTCCTCATCTTCATTTCAATTAGCTAAGGAGACACCTTTAATGGATGAGATATTGGGTATCGCAAAAGGGCAGCGCCTGATAATGAAGAAAATAGACAACCTCAATAACCTTCTCTGTGGAATTGGAGACATGGGAGAAAGGTCTGGCCAAGCAAGAACCACAAACATGGCTTCTGCTTCAGAATTCACTTCAGTCCGCACCTTGCTTGCTGTTACTTTTGGTTGTGTTGGATTATTCTTGGTGAAGGGGTTGGTATCTAGAACTTGA 1971 0.4125 MAQDTSAVDSHHRLPGLLKDQVCLVKRKDSDGYKIAPIQDQLSFEKGFFVVIRACQLLSKNNDGIILVGLAGPSGAGKTVFTDKIVNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSVQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRISVTGGVHFDLVKRVIRDIQRAGQQPAEIIHQISETVFPMYKVFIEQDLQTAHIKIINKFNPFTGFQSPTYILKSARNVTVEQIKAVFSENFKETNEQIYDIYLLPPGEDQETCQSYLRMRNKEGKYCLMFEEWVTDIPFVISPRISFEVSVRLLGGLMALGYTIASILKRNSHVFSDDRVSVKLDWLLQLNRQYVQVQGKDRSIVRCIAQQLGMEGSYIARTYIEQIQQEKILDEVMALPDDLKTKLGLDEDMVSSPKEALSKAFADRVPARKMHMSGMSQSYTSQRDKNLLKHTRYGAGNKGFGERNPDSSIALTNELSEQISSLNERMDEFTSRIEELNSKLIINKNSPSQQTTTLQSEACNGSAPTSHFITSLESGSLTGSLMKSSSSFQLAKETPLMDEILGIAKGQRLIMKKIDNLNNLLCGIGDMGERSGQARTTNMASASEFTSVRTLLAVTFGCVGLFLVKGLVSRT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0699 656 CDD UMPK_like 67 239 - -
Lele54g0699 656 Gene3D - 66 248 IPR027417 -
Lele54g0699 656 PRINTS Uridine kinase signature 132 147 - -
Lele54g0699 656 PRINTS Uridine kinase signature 65 82 - -
Lele54g0699 656 PRINTS Uridine kinase signature 188 198 - -
Lele54g0699 656 SUPERFAMILY CYTH-like phosphatases 266 407 IPR033469 -
Lele54g0699 656 Gene3D - 253 414 - -
Lele54g0699 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 236 IPR027417 -
Lele54g0699 656 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lele54g0699 656 Coils Coil 497 524 - -
Lele54g0699 656 Pfam CYTH domain 270 404 IPR023577 -
Lele54g0699 656 PANTHER URIDINE KINASE 34 423 - -
Lele54g0699 656 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0699 Lele-ChrLele54 13905617 13913974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0699 67 225 PRT Gene Family AT1G55810 29.762 3.49e-16 79.7