Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0697 ATGTCCTCATGGGGACGGCACAGGGGAAAAAGAAAACAGAGAGAATATCTCAAGGGATTTAGTTCACTGACACAGTTGTTTTTGGATGATTTACCTACAAACAAGAAAGTAGATATGGGTTTGTTCTGTTTAGCTCTGTTCTCCTTGTGGAGCTCTGTTTCTGGTTTGCTTTCTCCTAAAGGTGTAAACTTTGAAGTGCAAGCTCTAATGGGGATTAAAGCTTCCTTGGTGGATCCTCATGCGGTACTTCATAACTGGGATGGTGATGCTGTGGATCCTTGTAGCTGGGATATGGTTACTTGTTCTCCTGATCATTTTGTCATTTCCCTTGGAATTCCAAGCCAGAATATATCTGGGACTTTACCTCCAAGCATAGGAAACTTGACAAATCTTCAGACTGTGCTCTTGCAAGATAACAATATATCAGGACCAATTCCTTCTGAGTTGGGGAGGCTCCAAAAGCTTGAAACTCTTGATCTTTCTGATAATTCTTTTTCTGGTCAACTTCCTGATACTTTTTCTCATATGAAGAATCTTCATTACCTGCGGCTGAATAATAACAGTCTCACTGGAGAAATCCCATCTTCTTTGGCTAATATGACCCAGCTTACTTTTCTGGATATTTCTTATAATAACTTGAGTGGACCAGTACCTACCATAAAATCAAAAACATTCAATGTTGTAGGAAATCCCCAGATATGTGCTACTGGAATTGAGCAAAACTGCTTTAGAACCTCTGTACTTTCTTCTTCTTCTTCCTTGAATATTTCTCAAGATTCACAGTCCTCTGGTAGACCTAAACACCACAAAGTTGCTTTGGCATTGGCTTCAAGCATAAGCTGCATCTGCCTGCTAATTGTTGGCTTTGGTTTTGTCCTATGGTGGAGACAAAGATATAACAAGCAAATTTTCTTTGATGGTAGTGAACAATACCGCGAAGAAATTTGCCTTGGAAACCTCAAGAAGTTCAATTTCAGAGAGCTTCAGGTTGCTACAAATAACTTCAGCAGCAAGAACTTGATTGGCAAAGGTGGATTTGGGAATGTGTACAAAGGGTTTCTCCCTGATGGTACAATTATAGCAGTGAAGAGGCTTAAAGACGGTAATGCCATTGGAGGTGAGATCCAATTCCAGACCGAAGTCGAGATGATTAGCTTAGCCGTGCACCGGAACCTCCTTCGCCTCTATGGATTCTGTATGACAGATACTGAAAGACTCTTGGTTTATCCCTACATGTCCAATGGTAGTGTTGCTTCCCGTCTTAAAGCCAAGCCTGTTCTTGATTGGGGAACAAGAAAGAGGATAGCTTTAGGAGCTGCAAGGGGCTTGCTATATTTGCATGAGCAGTGTGATCCCAAGATCATTCACAGGGATGTGAAGGCTGCAAATATTTTGCTTGATGATTATTGTGAGGCTGTGGTGGGAGATTTTGGGTTAGCGAAGCTTTTGGATCACCATGATTCTCATGTGACAACAGCTGTTCGAGGCACTGTTGGGCACATAGCCCCAGAATATCTGTCAACAGGCCAGTCCTCAGAGAAAACAGATGTGTTTGGCTTTGGAATCCTCCTTCTTGAACTAATCTCAGGCCAGAGAGCTCTTGAATTCGGAAAAGCAGTAAACCAGAAAGGAGCTGTTCTTGACTGGGTGAAGAAGATTCATCAGGAGAAGAAGCTTGAATTGTTAGTTGACAAGGACCTGAAAAGTAACTATGATAAAATAGAACTTGAAGAAATAGTTCAAGTAGCACTTTTGTGTACTCAGTATCTTCCAAGTCATAGACCAAAGATGTCAGAAGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCTTCACAGAGAGCAGAATCAACAAGAAGCAGAGGGAATGAACTGTCTTCTTCAGAGAGATACTCTGATCTTACAGATGACTCTTCATTGCTTGCACAGGCAATGGAACTTTCTGGACCAAGGTGA 1968 0.4182 MSSWGRHRGKRKQREYLKGFSSLTQLFLDDLPTNKKVDMGLFCLALFSLWSSVSGLLSPKGVNFEVQALMGIKASLVDPHAVLHNWDGDAVDPCSWDMVTCSPDHFVISLGIPSQNISGTLPPSIGNLTNLQTVLLQDNNISGPIPSELGRLQKLETLDLSDNSFSGQLPDTFSHMKNLHYLRLNNNSLTGEIPSSLANMTQLTFLDISYNNLSGPVPTIKSKTFNVVGNPQICATGIEQNCFRTSVLSSSSSLNISQDSQSSGRPKHHKVALALASSISCICLLIVGFGFVLWWRQRYNKQIFFDGSEQYREEICLGNLKKFNFRELQVATNNFSSKNLIGKGGFGNVYKGFLPDGTIIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTDTERLLVYPYMSNGSVASRLKAKPVLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAVNQKGAVLDWVKKIHQEKKLELLVDKDLKSNYDKIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0697 655 FunFam Somatic embryogenesis receptor kinase 1 304 411 - -
Lele54g0697 655 MobiDBLite consensus disorder prediction 622 646 - -
Lele54g0697 655 SMART serkin_6 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0697 655 Gene3D Phosphorylase Kinase; domain 1 304 411 - -
Lele54g0697 655 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 43 615 - -
Lele54g0697 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Lele54g0697 655 Gene3D Ribonuclease Inhibitor 62 244 IPR032675 -
Lele54g0697 655 FunFam Somatic embryogenesis receptor-like kinase 1 412 624 - -
Lele54g0697 655 FunFam Putative LRR receptor-like serine/threonine-protein kinase 62 244 - -
Lele54g0697 655 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Lele54g0697 655 Gene3D Transferase(Phosphotransferase) domain 1 412 624 - -
Lele54g0697 655 ProSiteProfiles Protein kinase domain profile. 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0697 655 SUPERFAMILY Protein kinase-like (PK-like) 314 605 IPR011009 -
Lele54g0697 655 SUPERFAMILY L domain-like 65 227 - -
Lele54g0697 655 MobiDBLite consensus disorder prediction 612 655 - -
Lele54g0697 655 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Lele54g0697 655 Pfam Protein kinase domain 336 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0697 655 Pfam Leucine rich repeat N-terminal domain 65 102 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0697 Lele-ChrLele54 13894582 13898923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0697 39 655 Receptor kinase-like Gene Family AT5G16000 73.878 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele54g0697 Pkinase 1.4e-43 CL0016