Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0680 ATGGTAATTGGCTTCATTCTCATCAGCGGAGAAGCAATCTTGGTTCAGAGATGGTTTCCTGGTTCGAGAGGGTTGAAGAAATGTGTGCATTTGTGGCTTCAAGGGCTGGCTATGACTTGTGGCTTCTTTGGGATTTGGACTAAGTTTCAGGGCAAAGATGGCATTGTGGCTAATTTCTATAGCCTTCATTCGTGGATGGGTTTGCTTTGCATCTCCCTCTTTGCCGCTCAGTGGTTGATAGGGTTCTGGAACTTCTGGCACAGAGGAGAAGTGAGGAAGGTGAGGCACAGAATTCTACCTTGGCATGTGTTCCTGGGTCTCTACACATATGGTCTTGCTGTTGCAACAGCAGAAACTGGACTTGCAGAGAAGCTCATTTTCTTACAACAAGCTGGAAAAACCAACTTATCCAAACACACTGCAGAATCTATGGTGGTTAATAGTTTAGGTTTAGGCCTTGCCCTCTTAAGCGTTCTTGTTGTTTTTGCTGCTCTTTCACCTATTAGGAACCAGCAGCTACAACAATCTCTCCAAACCAAACTTTCATTCTCTGATTCCACCGCCATCAAGAAGGGATTGCTTGTGCTTGTCTTCTTCTAG 600 0.45 MVIGFILISGEAILVQRWFPGSRGLKKCVHLWLQGLAMTCGFFGIWTKFQGKDGIVANFYSLHSWMGLLCISLFAAQWLIGFWNFWHRGEVRKVRHRILPWHVFLGLYTYGLAVATAETGLAEKLIFLQQAGKTNLSKHTAESMVVNSLGLGLALLSVLVVFAALSPIRNQQLQQSLQTKLSFSDSTAIKKGLLVLVFF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0680 199 ProSiteProfiles Cytochrome b561 domain profile. 1 165 IPR006593 -
Lele54g0680 199 PANTHER CYTOCHROME B561-RELATED 1 166 IPR043205 GO:0016491
Lele54g0680 199 SMART 561_7 1 121 IPR006593 -
Lele54g0680 199 FunFam Cytochrome b reductase 1 1 174 - -
Lele54g0680 199 Pfam Eukaryotic cytochrome b561 1 127 IPR006593 -
Lele54g0680 199 Gene3D - 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0680 Lele-ChrLele54 13729599 13731555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0680 1 180 Chloroplast and Mitochondria Gene Families AT1G26100 64.324 1.99e-74 222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0680 54 13729599 13731555 Lele55g0818 55 5582837 5586027 hybridization
Lele54g0680 54 13729599 13731555 Lele56g0761 56 5770423 5773288 hybridization