Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0671 ATGCTGATTCCGACGAGAGTGATGGCCTGGGGAAGGGTTGGCAAGTCTCTTCAAGCTGTGGTTGCTCATGCCTTGCTCTTCTCATTCACGATCCTGCTTGTTCTCAAGATTGACCATGTCGTCTCTTACTCATGGTGGTACGCCATTTCACTGGTTCAAGTCCTTGAAGTTTGTAGCGAGGCTTTAATCACAAGTGGACTTTCGTATATATACTGGGCTCCTTATCTTGCCATCATGGCAACTCCATTGCTTGTTTCTTTTGAGCTACTTCTCTGTTTACATCTTGAGAGCTCATATGCTAACTTGCTCTCCATCATCTGCAGATACGAGGACCAGGGTAGCAGCTTAGATAGGCAGCAAAGTGGGTTATGTAATCTGCAGAACATTGGTGGAGCCGGTGTTTTATTCGCTGCTTATAGATTAGTGGAAAAGCTGGTACTTTTACTTTATAGTGGAGAAATTTCTGCGAGATACTCTGCTGTTGCATCAAAAGCCCAAGATTGCTTTGGTTTCTTGGATCGTGGATCAAGGTTGCTGGGTTGGTGGTCGATAGATGAAACAAGTAGAGAGGAACAAGCTAGAATTTACTATGATGGGAGTTCAAAGTATAAGACTTTCTCCCCTGATGTGGTGAAGAAAATGCCTAGAGCAGCTCTTGCAAAGGAGATTTGTAGACTACAGGCTGCATTGACTGAGCAGACCGATGTCACAAAATTTCGCCAGCAGCAGTATGAAAGACTTCAAAATCAGCCTTGGTTGATATTTACTTTCTGCATTACTAATCTTCAAATTTGTTGA 798 0.4336 MLIPTRVMAWGRVGKSLQAVVAHALLFSFTILLVLKIDHVVSYSWWYAISLVQVLEVCSEALITSGLSYIYWAPYLAIMATPLLVSFELLLCLHLESSYANLLSIICRYEDQGSSLDRQQSGLCNLQNIGGAGVLFAAYRLVEKLVLLLYSGEISARYSAVASKAQDCFGFLDRGSRLLGWWSIDETSREEQARIYYDGSSKYKTFSPDVVKKMPRAALAKEICRLQAALTEQTDVTKFRQQQYERLQNQPWLIFTFCITNLQIC 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0671 265 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 100 - -
Lele54g0671 265 Pfam Transmembrane Fragile-X-F protein 35 101 IPR019396 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0671 Lele-ChrLele54 13659172 13663648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0671 78 250 C3H Transcription Factor Family AT1G73950 52.841 1.42e-49 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0671 54 13659172 13663648 Lele55g0829 55 5661729 5665581 hybridization
Lele54g0671 54 13659172 13663648 Lele56g0769 56 5829024 5833791 hybridization