Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele54g0664 | ATGGGTCCCCCAGCCTTTAAAATCGTCCTGAGCGGTGTGGAGGAGAGGAGAAGAGAAGAGCTGAAGAAGATGGTTGATGTCTTGCTCAAACCCCACCTGATGTTGGGGTTCTCCGATTATATTCAAGCATTAGAATCTGAAAGCCGTAAAATCCGCGTCTTCTCCAAAGAGCTTCCTCTTTCCTTGGAGCTCGTTACCCAAGCCATTGAAGCCTGTAGACTACAGCTGCGTGGAAGGACGACGTCGGAGGAGCAGAATTTGAACCGGCAATCAGAGTGTTCATCAGGACAGACATCATCGGAAGGACCTGTTTTGGAGGAGTTCATACCTCTAAAGAAAAGACCATCCTCGGATTGTGGGGAAGAAGACGAAGAAGGAAATGAGCAACACTCGCATAAACCCAAGATTGCCAAGGATAATAATAACAACACTGATAAGAAAAAATCAGATTGGCTTAGATCCGTACAACTCTGGAATCCACAATCCCCAGTTAAAGAGGGTATTCCTAGGAAAACGTCGGTGTCGGAATTAAACAGAGACGGTGGTGCTTTCCGGCCATTCCACAGAGAAGCTAGTGTAGGAAAAGCTACCGTTTTAACAGCCAAAGCATCATCTTCGCCGGTGCAGACGCCTCCTGTCGCCGGAAGCAACAAGAGAGAAGAGAAAGAAGGACATAATAATAAAAGGAATAAGCAACGACGGTGCTGGTCTCAGGAGCTGCATAAGCGCTTCGTGAACGCCCTCCAGCAACTTGGTGGAGCAGATTCTGCAACACCGAAGCAGATAAGGGAACTTATGAAGGTTGATGGATTAACAAATGATGAAGTGAAGAGTCATTTACAGAAATTTCGATTGCACACGAAGAGGCCAAGCCCATTGATTCAGAACAATAATGGTGATTCACAAGCGGCTCCATTTGTAATCGTGGGGAACTTTATAGTGGGACCGCCGGAACATGCGGCGGCGGTGCCTGGGATTTATGCTCCGGTGACGTCGGATGCAGCTGCGGTGGCACGGGCGGCGGTTCCGACGAAGGGTCAGGGAAGGCAATTACGTTCAAATTCAGAAGACAGCGAAGTGGCGGATCATACAAATTCACCAACTTTGTCTTCCTCAACACATACCACCACAGCTTCCCCTCGTTATTAA | 1149 | 0.4813 | MGPPAFKIVLSGVEERRREELKKMVDVLLKPHLMLGFSDYIQALESESRKIRVFSKELPLSLELVTQAIEACRLQLRGRTTSEEQNLNRQSECSSGQTSSEGPVLEEFIPLKKRPSSDCGEEDEEGNEQHSHKPKIAKDNNNNTDKKKSDWLRSVQLWNPQSPVKEGIPRKTSVSELNRDGGAFRPFHREASVGKATVLTAKASSSPVQTPPVAGSNKREEKEGHNNKRNKQRRCWSQELHKRFVNALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTKRPSPLIQNNNGDSQAAPFVIVGNFIVGPPEHAAAVPGIYAPVTSDAAAVARAAVPTKGQGRQLRSNSEDSEVADHTNSPTLSSSTHTTTASPRY | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele54g0664 | 382 | Gene3D | - | 230 | 288 | - | - | |
Lele54g0664 | 382 | FunFam | Myb family transcription factor | 230 | 288 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 81 | 102 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 198 | 213 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 81 | 233 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 107 | 152 | - | - | |
Lele54g0664 | 382 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 228 | 288 | IPR017930 | - | |
Lele54g0664 | 382 | Pfam | Myb-like DNA-binding domain | 233 | 282 | IPR001005 | - | |
Lele54g0664 | 382 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 37 | 361 | IPR044787 | GO:0003700|GO:0006355 | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 216 | 233 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 341 | 382 | - | - | |
Lele54g0664 | 382 | MobiDBLite | consensus disorder prediction | 347 | 382 | - | - | |
Lele54g0664 | 382 | SUPERFAMILY | Homeodomain-like | 230 | 289 | IPR009057 | - | |
Lele54g0664 | 382 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 231 | 286 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele54g0664 | Lele-ChrLele54 | 13564508 | 13568969 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele54g0664 | 34 | 330 | G2-like Transcription Factor Family | AT1G68670 | 46.130 | 1.42e-74 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lele54g0664 | Myb_DNA-binding | 2.1e-05 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele54g0664 | 54 | 13564508 | 13568969 | Lele55g0835 | 55 | 5742554 | 5744033 | hybridization | |
Lele54g0664 | 54 | 13564508 | 13568969 | Lele56g0777 | 56 | 5918103 | 5919596 | hybridization |