Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0659 ATGAGGAAAAGCGTGAAGCTGATGATTTTTCCCCCTTTCTTTCTTTCTTTCTCTGTTTCTATGGTTTCAAACAGGGGAGATGGCGCCGGCAGAAATCCTACGCGTTTCTCTGATATTGGAGAGCTTCAACATTCCGTTTCTCCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAGTCTCTTTCTAATACCTGTATTCCTTAACATCGGGTGTTCAGAGATTGCTTCACCTGGGGCTGGGTGCCTTGATACAGGGCAGCATCTCACGTATCAGAAGGGACTCACGGCTGCCGGAGCCGTCGTGCCGGTGGGGAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAATAGCCAACACACTGATACTTCCACGGATATCGACCCCGATGATAAAAACCAATGTAATAGAGTTCAGGCTGGGAGAGCCGTGGTTGCTGATTCCATGGATCAACCTAAGGCCAAAGCTGAGGATCCAAAGACTCTTCGTAGGCTCGCTCAGAATCGAGAGGCTGCGAGAAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGCGTGAGACTAGCACAACTCGAGCAAGAGCTTCAACGCACACGACAGCAGGGAATGGTTGTTGCAAGTGGATTTCCTAGTGATCATAGTCATTCAATGGTCGGAAACGGAACCTTAGCATTCGACATGGACTACGCGCGCTGGGTCGATGAGCATCAACAGCTGATAAATGACCTAAGAGCGGCTGTTAATTCTCAAATGGGAGATAATGAACTGCAAATTGTTGTCGAGGGCATTACAGCGCATTACGACGAGTTATTCAGGTTAAAGAGCATCGGGGCGAAGGCTGATGTATTTCACATGCTCTATGGTATGTGGCAGACACCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTGAGGAACGAGCTTGAGCCATCAACAGAGCAGCAATTGGTGGGGTTGTATAATTTGCAGCAATCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGAGACACTTTCCTCAACCTCCCTAGGACCCGCCGGTTCAGGAAATGTCGCCGAATACATGGGTCAAATGGCACTTGCTATGAGCAAACTCGCCACGTTGGAGAGTTTCCTACATCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAACTGCAAAAGATCTTAACCACACGACAAACCGCACGTGCATTCCTCGTGATAAATGACTACATTTTGCGACTACGAGCACTTAGTTCATTATGTGATGTTCTAGAATCCAAATCTCAATCTGACTCCTAA 1365 0.4696 MRKSVKLMIFPPFFLSFSVSMVSNRGDGAGRNPTRFSDIGELQHSVSPFQHDDAVDLSSSLFLIPVFLNIGCSEIASPGAGCLDTGQHLTYQKGLTAAGAVVPVGNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNQCNRVQAGRAVVADSMDQPKAKAEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRTRQQGMVVASGFPSDHSHSMVGNGTLAFDMDYARWVDEHQQLINDLRAAVNSQMGDNELQIVVEGITAHYDELFRLKSIGAKADVFHMLYGMWQTPAERCFMWLGGFRSSELLKILRNELEPSTEQQLVGLYNLQQSSLQAEDALSQGMEALHQSLSETLSSTSLGPAGSGNVAEYMGQMALAMSKLATLESFLHQADLLRQQTLQQLQKILTTRQTARAFLVINDYILRLRALSSLCDVLESKSQSDS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0659 454 Coils Coil 182 209 - -
Lele54g0659 454 SUPERFAMILY Leucine zipper domain 163 207 IPR046347 GO:0003700|GO:0006355
Lele54g0659 454 Pfam Seed dormancy control 248 322 IPR025422 GO:0006351|GO:0043565
Lele54g0659 454 Gene3D - 162 212 - -
Lele54g0659 454 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 205 IPR004827 GO:0003700|GO:0006355
Lele54g0659 454 SMART brlzneu 159 212 IPR004827 GO:0003700|GO:0006355
Lele54g0659 454 FunFam BZIP family transcription factor 162 211 - -
Lele54g0659 454 Pfam bZIP transcription factor 163 202 IPR004827 GO:0003700|GO:0006355
Lele54g0659 454 PANTHER TRANSCRIPTION FACTOR TGA9 109 443 - -
Lele54g0659 454 CDD bZIP_HBP1b-like 163 210 - -
Lele54g0659 454 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
Lele54g0659 454 ProSiteProfiles DOG1 domain profile. 230 446 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0659 Lele-ChrLele54 13507816 13511084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0659 1 442 bZIP Transcription Factor Family AT1G68640 58.478 1.85e-158 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele54g0659 DOG1 7.4e-29 No_clan