Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0645 ATGACAAACCCTCTGACGAACCTCACAAAACCTGGGAACCTGATGAATTTCCCCAAAACGGTAAAGCAAAAGCCTCATGTTCTTCCTTTACGAAAGAAGCCTGTAATATCCAGAAAACTTCGGATTATTTATAACGATCCTGAAGCCACAGATTCTTCTTCAAGCGAAAACGAAGAAGTGTGGCAAAGCAGAAGGCTGAAAAGGGTAAAACGATGCGTTCAAGAGCTCACTCTTCCCCCTCTTCTTGAGAAGCCTAAACCTGTTGTTAAAACTGAGCGCTTAAATCGTAACTTGAATGGCAAAGGAGTTACAGTTAAACCTAAAGCACCAAGGAGACGTTTGTCTTCACAATACAGAGGCGTTAGACTCAGAAACTCGGGGAAATGGGCTGCGGAGATTCGTCATCCGATCAAGGGTCGTAAATGGTTGGGTACTTTTGATACTCCAGAGGAAGCTTCTCAAGCTTATGAAGCTAAAAGAAGAGAGTTTGAAGCCATGGATTTCTCTAAGAAGAGCCCTCCTTCTGTTACTGTTTATTCATATTCATCTTCTTCCGCGGAAGATTCCAGTAGTGTTATTTCTCAGTCATCATCACCTCCTTCTGTTCTTGAAGTCTATAATGGTCGAATTTCAAGCAAAGAAGTTGATTATTTCGAGTCTGCGCTTTCAGCTTTGCAAATGCCTGATTCAAGTTTGACGAATTCGTCAGAGGATTACAACAAGACTTCAAGGAATGAAGCGAGTGATTTGGCGTCTGAACTTGATTTGAGTTTATCGGAAGTGCCAATTCCAGTTTGTTCATCAGAGCCTAATCACCTGTATGAGCTTGATTGTTTGATGGTGAATGATTTGGATCAGAATTTTAAAGATGACGATGATCTTTCTGGGTTGCTGGGTATTGGAATTTGTGGGTTAAACGAGGATGTGCCTTGTGAACTTCCAGATTTCGATTTTGGAGATTTTGGTGAAGATGATGAGTTTGCCGGTTGGATTGAGGAATCCCTCGATATACTGCCATGGGCATGA 1026 0.4191 MTNPLTNLTKPGNLMNFPKTVKQKPHVLPLRKKPVISRKLRIIYNDPEATDSSSSENEEVWQSRRLKRVKRCVQELTLPPLLEKPKPVVKTERLNRNLNGKGVTVKPKAPRRRLSSQYRGVRLRNSGKWAAEIRHPIKGRKWLGTFDTPEEASQAYEAKRREFEAMDFSKKSPPSVTVYSYSSSSAEDSSSVISQSSSPPSVLEVYNGRISSKEVDYFESALSALQMPDSSLTNSSEDYNKTSRNEASDLASELDLSLSEVPIPVCSSEPNHLYELDCLMVNDLDQNFKDDDDLSGLLGIGICGLNEDVPCELPDFDFGDFGEDDEFAGWIEESLDILPWA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0645 341 SUPERFAMILY DNA-binding domain 116 163 IPR016177 GO:0003677
Lele54g0645 341 Pfam AP2 domain 117 165 IPR001471 GO:0003700|GO:0006355
Lele54g0645 341 CDD AP2 116 158 IPR001471 GO:0003700|GO:0006355
Lele54g0645 341 ProSiteProfiles AP2/ERF domain profile. 117 173 IPR001471 GO:0003700|GO:0006355
Lele54g0645 341 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 233 - -
Lele54g0645 341 SMART rav1_2 117 175 IPR001471 GO:0003700|GO:0006355
Lele54g0645 341 Gene3D AP2/ERF domain 116 169 IPR036955 GO:0003700|GO:0006355
Lele54g0645 341 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Lele54g0645 341 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0645 Lele-ChrLele54 13399014 13400039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0645 28 320 AP2-EREBP Transcription Factor Family AT1G68550 34.448 3.68e-33 123