Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0641 ATGACTTCTGCTAAGAACGCCGCTAGCGCCGTCGGCGGAAAGACCGTCAGAGCCTGTGACAGCTGCATAAGGAAGCGTGCTCGCTGGTACTGTGCCGCCGATGATGCTTTCCTCTGCCAGTCTTGTGACTCTCTGGTTCACTCCGCCAACCCATTGGCTCGCCGGCATGGAAGGCTCCGATTGAAAACTGCGTCGTTTAAATCCTCCTCCGATGAACTCGTTCTAGCAGCCGTCGATCTCACCCTGGCTCCCTCGTGGCACCAAGGTATCACCAAGAAGCCCCGCACTCCTCGACATGGCAAGAACCAGTCTTCATCGTCTGCCAATCAAACGCCCAGAGGACGATACGAACCCACCAGAAACCCGTTCCATCTTGTGCCGGAAGTGGGTTCCGATGAATATTCCAATTCTCACGACGAAAACGAAGAGCAGCTTCTTTATCGGGTACCCATATTCGACCCATTGGTCACAGAGCTATGTACTCCTCCGTCGTCTGCAACTTCAGCCGAAGCAGCAACAGCAGCTACGCCCGGCGCTCCAAACCAGACGGACGACAATAAAATATCATCGGGAAACAAAAGCAATAGTAATAATAGAGTGGACAATTTACACGGGTTTCTTCCATCTGAAATGGAACTTGCTCAGTTCGCGGCTGATGTAGAGAGTTTACTGGGCAGAGGATTAGAGAATGAGTGCATAGGCATGGAGGATTTAGGGCTTATTGACAGTAAAGAGAAGGAAGAATCGAAAGAGTGTTGTGTGATGGGTAGTGAAAAAGTGAAGGTGGAGGAAGATGAAGAGAGCCCATGTAAGATTGAAACTGCAAATGAGATTGATATGGAGATGGGAATCAGAGAACCATTTGAATTGAACTTCGATTATGATGACTCTACGGCGACACGCGAACAACCGGACGACGACGACGAGAAGAAGGTCGAGATGAGGAATAACGAAGGAGAACTCAAAGCAAATAGTAATCAGAGAAAGAGGAAGATACTGTTGCAGTTGGACTACGAAGCAGTCATTTCAGCTTGGAAATCTCAGAAATCTCCATGGACAACCGGCGGCAAACCAGAGTTGGAAGCCGACGAGTGTTGGCCGGAGTGCATGGGGACTTGTGGAACGGAGCTTCGTCAACCCTACTATGGAGAAATGGGGACATACGGCGGGTGCCAAGCCGGAGGGATGGGAGACGGGGGGAGAGAAGCGAGAGTGTCGAGGTACAGAGAGAAGAGGAGGACGAGATTGTTCTCAAAGAAAATAAGGTACGAGGTTCGGAAATTGAATGCAGAGAAGAGACCTAGAATGAAAGGGAGGTTTGTGAAGAGGGCTTCTTTTGCAGTTGCAACACAACAACCCCCATCTTCATCTTCATGCCCTTTGCTCAGCAGATAA 1395 0.4989 MTSAKNAASAVGGKTVRACDSCIRKRARWYCAADDAFLCQSCDSLVHSANPLARRHGRLRLKTASFKSSSDELVLAAVDLTLAPSWHQGITKKPRTPRHGKNQSSSSANQTPRGRYEPTRNPFHLVPEVGSDEYSNSHDENEEQLLYRVPIFDPLVTELCTPPSSATSAEAATAATPGAPNQTDDNKISSGNKSNSNNRVDNLHGFLPSEMELAQFAADVESLLGRGLENECIGMEDLGLIDSKEKEESKECCVMGSEKVKVEEDEESPCKIETANEIDMEMGIREPFELNFDYDDSTATREQPDDDDEKKVEMRNNEGELKANSNQRKRKILLQLDYEAVISAWKSQKSPWTTGGKPELEADECWPECMGTCGTELRQPYYGEMGTYGGCQAGGMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVATQQPPSSSSCPLLSR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0641 464 MobiDBLite consensus disorder prediction 100 116 - -
Lele54g0641 464 Pfam CCT motif 401 443 IPR010402 GO:0005515
Lele54g0641 464 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Lele54g0641 464 Pfam B-box zinc finger 17 57 IPR000315 GO:0008270
Lele54g0641 464 MobiDBLite consensus disorder prediction 291 326 - -
Lele54g0641 464 ProSiteProfiles CCT domain profile. 401 443 IPR010402 GO:0005515
Lele54g0641 464 MobiDBLite consensus disorder prediction 162 202 - -
Lele54g0641 464 MobiDBLite consensus disorder prediction 88 140 - -
Lele54g0641 464 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 445 - -
Lele54g0641 464 CDD Bbox1_BBX-like 18 61 - -
Lele54g0641 464 SMART bboxneu5 14 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0641 Lele-ChrLele54 13347160 13348661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0641 5 443 C2C2-CO-like Transcription Factor Family AT1G25440 44.820 1.25e-106 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele54g0641 CCT 1.6e-17 CL0281