Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0633 ATGGGCCTTCCTTCTTCCTTCTCAATAGTTCACTCCCACCATTGCTCTGTTCCTGTTAGGTTTCAGGAGTCTTCTTCTTCTTCGCTTACCCTTTTCCCTGCAACCACTTCTTCTTCTTCTTGTTCTTCTTCCCGCAGGCTTCGTTGGCCGCGAATGGATGCTGACTCTTCCTATTACCGCCATCGCTGGAAAGACAAGGTGGTTCTCATAATGGGTGCCACCGGCTGTGGGAAGTCTCGCTTGTCCATCGACATCGCCACCCGTTGCGCCTGCTCGGAAATCATAAACGCAGATAAAATGCAACTTTACAGAGGACTCGACATCGCCACCAACAAGATTCCTTTGGTTGAACGGAACGGCATCCTGCACCACCTCCTTGGAGATGTCGACCCTGCAAACGGAGAGTTCTCGCCGTTGGATTTTCGTTCAGTCGCCGGGTCCATTATTTCCGATATCAACTCGAGGAGGAAGCTTCCCATCGTTGCCGGTGGCTCGAACTCGTTGATTCATGCTCTTGTTGTGGACCAGTTTGACCCGGCGTTAAATGTGTTCGATGAAGGATCGTCACCGAGTTTGATCTCGTCCGAGTTTAGGTACAACTGTTGCTTCCTCTGGGTAGACGTGTCGTTCCCTGTGTTATCAGATTACTTGTTGAGACGAGTCGACGACATGCTCGACATGGGAATGGCGGACGAGTTGGCTCAGTTCTTCGACCCGGAAGCGAGCGACCTAGAAGATGACTCAGAGAACCGGGTCGGGTTAAGGAAGGCGATTGGAGTACCCGAATTCGACCGGTATTTTAAGCGATATCCACCATCGGGTGGGCTGAGAAGGGAAGAGGATCGGCTGCGGAAGGCCGCATACGAGGAGGCAGTGAGGGCGATAAAGGAGAACACTTGTCGGCTAGCGAAAAAGCAAATAGGGAAGATCTTGCGGCTTAAAGAGGCAGGGTGGGACCTACGGAGGCTGGACGCCACAGAGTCGTTCCGAGCGGCGATGACGCCGTCGAAATGCTTCGACGACGGCGGTGAGAGATGGTCAGATATTTGGGAGAGACAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1107 0.5266 MGLPSSFSIVHSHHCSVPVRFQESSSSSLTLFPATTSSSSCSSSRRLRWPRMDADSSYYRHRWKDKVVLIMGATGCGKSRLSIDIATRCACSEIINADKMQLYRGLDIATNKIPLVERNGILHHLLGDVDPANGEFSPLDFRSVAGSIISDINSRRKLPIVAGGSNSLIHALVVDQFDPALNVFDEGSSPSLISSEFRYNCCFLWVDVSFPVLSDYLLRRVDDMLDMGMADELAQFFDPEASDLEDDSENRVGLRKAIGVPEFDRYFKRYPPSGGLRREEDRLRKAAYEEAVRAIKENTCRLAKKQIGKILRLKEAGWDLRRLDATESFRAAMTPSKCFDDGGERWSDIWERQVAEPSVKIVKRFLKE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0633 368 Pfam IPP transferase 195 307 - -
Lele54g0633 368 Pfam IPP transferase 101 175 - -
Lele54g0633 368 FunFam Adenylate isopentenyltransferase 210 320 - -
Lele54g0633 368 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 64 366 IPR039657 -
Lele54g0633 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 245 IPR027417 -
Lele54g0633 368 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 210 320 - -
Lele54g0633 368 Gene3D - 64 366 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0633 Lele-ChrLele54 13244325 13245431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0633 198 367 C2H2 Transcription Factor Family AT2G27760 28.497 4.54e-12 65.1