Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0631 ATGCAGAATCCGGCGAGTCCCTACTATCTCCATATGGAGGAGAACCTTACGCAGGTACATATCGGTTCAATCGCATTAAAAGTCTTCTCTTCAAGTTACAGGAAGCATGGCTTACGTCACGATTTTAATGATCTAGCGTTGGCTACAGTGGGATATTTAATTTCTTGCTGGTTGCGCGTTGGGCAATCTGAATGTGACCATTTTGGGATTAAGGTAATCAAGAATATCATGAGGTTGTTGAGAGACGGGTCTTTACAGACAATAGATAGATTAATTGAGACAGGAGACAGTGAGCAAATTTTCCAGAAGGCTATTCAGGAACAAGGAAGAGGCCAGATAATAGACACCCTGGCAGAAATTCAAGCACGCCACGAAGCAGTTAGAGATGTTGAGAGGGAACTTCTTGAATTACAACAGATATTCATGGACATAGCAGTGCCAGTTGATGCACAGGGGGATATGCTGGACAATATAGAATCACAGATTCTCGCTTTCTTTACTATCATGATCGAGTCCCTGTTCAAAGATTCTTTGCAGAACCCGTGA 546 0.4267 MQNPASPYYLHMEENLTQVHIGSIALKVFSSSYRKHGLRHDFNDLALATVGYLISCWLRVGQSECDHFGIKVIKNIMRLLRDGSLQTIDRLIETGDSEQIFQKAIQEQGRGQIIDTLAEIQARHEAVRDVERELLELQQIFMDIAVPVDAQGDMLDNIESQILAFFTIMIESLFKDSLQNP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0631 181 Gene3D - 54 165 - -
Lele54g0631 181 SUPERFAMILY t-snare proteins 85 163 IPR010989 GO:0016020|GO:0016192
Lele54g0631 181 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 117 162 IPR000727 -
Lele54g0631 181 CDD SNARE_syntaxin1-like 116 163 - -
Lele54g0631 181 PANTHER SYNTAXIN 99 162 IPR045242 -
Lele54g0631 181 Pfam Syntaxin 85 152 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0631 Lele-ChrLele54 13227917 13231647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0631 86 162 SNARE and Associated Proteins AT3G03800 76.623 1.74e-36 127