Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0629 ATGGATCATCAACGGCTGAAGTTTCCATTGATTCAGACATCAGAAAGCCTAGGGGAGAATTCTTCTTCTCTACAACATTCTGCAGATTTTCCAGAAATCAGAAAGAAAGCAGTTGGATTCAAAAGGAAGAGAAACAATAAGGGGATTGAAGAGAAACGGAAAGAAGTAATCCACGTAAGAGCAAAAAGAGGTCAAGCTACTGATAGCCACAGTTTAGCAGAACGGGTGAGGAGAGAGAGAATCAATGAGAAGATGAGATTTTTGCAGGATCTGGTTCCAGGCTGCTACAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATCATAAACTATGTTCTATCACTACAGCAACAGATTGAGTTTCTCTCCATGAAGCTCTCAGCAGCAAGCATGTGTTTTGATTTCAACACCTACCACATAGATTCCCTCCAAACCATGCAGAGAAGCACTAGCACAGATGGAATCCAAGGGATGGAAGGAGAAGGTTATGGAGGCTTTGCTTATTGGAATCCTACATGGCCTCTTCAATAA 531 0.42 MDHQRLKFPLIQTSESLGENSSSLQHSADFPEIRKKAVGFKRKRNNKGIEEKRKEVIHVRAKRGQATDSHSLAERVRRERINEKMRFLQDLVPGCYKAMGMAVMLDVIINYVLSLQQQIEFLSMKLSAASMCFDFNTYHIDSLQTMQRSTSTDGIQGMEGEGYGGFAYWNPTWPLQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0629 176 Pfam Helix-loop-helix DNA-binding domain 69 93 IPR011598 GO:0046983
Lele54g0629 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 135 IPR036638 GO:0046983
Lele54g0629 176 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 35 142 IPR024097 GO:0006355
Lele54g0629 176 CDD bHLH_AtBPE_like 55 140 - -
Lele54g0629 176 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 115 IPR011598 GO:0046983
Lele54g0629 176 SMART finulus 71 121 IPR011598 GO:0046983
Lele54g0629 176 Gene3D - 65 128 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0629 Lele-ChrLele54 13215818 13217319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0629 51 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 75.258 3.10e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele54g0629 HLH 0.00013 No_clan