Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0619 ATGGCGGTGCCCTCTCGCCTCTTTCTACTTGTTTTCTTCTTCTTCTTAGTTCCTCATTTGCTTCTTCCCGCTGAAGCGTCCCTAAACCAAGATTTAGAAGCTCTCATTGCGTTCAGAGCCGCTTCTGATACGCACAACAAGCTCACATCTTGGAACTCCACCACCCACCCCTGTAACTGGGTCTTTGTATCATGCCTCAAGAATCGAGTTTCGCGACTTGTTCTTGAAAATCTCGATCTCCATGGTTCTATCGAGCCGTTAACTTCTCTCACTCAGCTTCGAGTTCTGAGCCTGAAGCGAAACCGTTTCTCCGGTCCCATTCCCAGTCTGTCTAATTTTACAGCTCTCAAGCTTCTGTTTCTTTCTCACAATCAGTTCTCCGGTGAGTTTCCGGTGTCGGTTACGTCGCTTCTCCGCTTGTATCGCCTTGATCTGTCTCACAACAACTTTTCCGGCGACATTCCGACTACCATCAACAATCTCACTCACCTTCTCTCTCTCCGCCTCAATGACAACCAGTTCTCCGGTCAAATTCCCATTCTAAACCTCTCCAAACTCCAAGATTTCAATGTCTCCGGTAACCGCCTCTCCAGCGAAATCCCCAAATCACTCTCGGGTTTCCCCGAATCATCATTCTCTCAAAACCCATCCTTATGTGGAACTCCATTGGTGAAATGTAACGACACTCATGCCGTACCATTTAAACCCGGATCTGTGGGACCCAACATTCCATCGCCATTAACTCCGCGAAGCAATCCTTCAACGCCGGTGAACAACACAGCCCCGAAAACATCATCTAACAGCACACACAACCATCATAACAACGGAGCTTCTTCCAAGATGAGCCCAGTAATTCTAATCGCCATTATAGTCGGCGACGTTCTGGTTCTGGTTGTAGTATCCCTTCTTCTGTACTACTGTTTCTGGCAAAACTACTCCGCAAAATTGAAAGAAGGAAACATGTCGAACCTTCTGGAAAGCGAGAAGATCTTGTATTCATCAAGCCCATACCCATCAAACCAACCGGGATTCGAGAGGGGTCAAATGGTGTTCTTCGATGGGATGAAGAAGTTCGAACTAGAAGACTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTTGGAACGGCGTATAAAGCTGTTCTTGACGACGGTAATGTCGTCGCCGTGAAGAGGCTTAAGGAAGCTCAGATTAATGGGAAGAAAGAGTTCGAACAACACATGGAAATTCTGGGAAGATTAAGGCATCCCAATATTGTTTGCTTGAGAGCTTACTATTTTGCTGGAGATGAGAGATTGCTGGTTTATGATTACATGACCAATGGCAGCTTGTTTTGGCTCCTTCATGGGAACCGGGGACCCGGGAGAAGCCCATTGGATTGGACCACGAGGCTCAAGATAGCCTCCGGGGTGGGCAGAGGTCTGGCCTTCATACACAGCTCATGCAAGGCCGTTAAGCTCACCCACGGTAACATCAAATCCACCAACATCCTCATTGACCAGGACGGTGACCCACACGTGGCAGACTTCGGGCTCTCTGTTTTCGCATCCCTCGCCCCCAAATCTAACGGCTATCGTGCCCCGGAAGCATTGGATGGTCGGAAAAACACGCAGAAATCAGACGTGTACTCCTTTGGTGTTCTTCTGCTGGAGCTTCTCACAGGGAAGTGCCCCTCTGTAGGGGATGCTGGTGGGCCCGGAGGAGGTGGGGCCGTGGACCTACCGAGGTGGGTCCAGTCAGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATTGAGCTGATGAGGTACAAGGACATTGAAGAGGAGATGGTGGGGCTGCTTCAGATCGCCATGGCTTGTTGCTCGGCTGTGCCAGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGACATACGTGGGGTCGAGATTTCACCGAGTCATGACACGTCGGACTCGGTGTCTGAGTCGCCATCCTTGTCGGGCTAA 1986 0.5 MAVPSRLFLLVFFFFLVPHLLLPAEASLNQDLEALIAFRAASDTHNKLTSWNSTTHPCNWVFVSCLKNRVSRLVLENLDLHGSIEPLTSLTQLRVLSLKRNRFSGPIPSLSNFTALKLLFLSHNQFSGEFPVSVTSLLRLYRLDLSHNNFSGDIPTTINNLTHLLSLRLNDNQFSGQIPILNLSKLQDFNVSGNRLSSEIPKSLSGFPESSFSQNPSLCGTPLVKCNDTHAVPFKPGSVGPNIPSPLTPRSNPSTPVNNTAPKTSSNSTHNHHNNGASSKMSPVILIAIIVGDVLVLVVVSLLLYYCFWQNYSAKLKEGNMSNLLESEKILYSSSPYPSNQPGFERGQMVFFDGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKEAQINGKKEFEQHMEILGRLRHPNIVCLRAYYFAGDERLLVYDYMTNGSLFWLLHGNRGPGRSPLDWTTRLKIASGVGRGLAFIHSSCKAVKLTHGNIKSTNILIDQDGDPHVADFGLSVFASLAPKSNGYRAPEALDGRKNTQKSDVYSFGVLLLELLTGKCPSVGDAGGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMACCSAVPDQRPRMSHVVKMIEDIRGVEISPSHDTSDSVSESPSLSG 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0619 661 Gene3D Ribonuclease Inhibitor 140 223 IPR032675 -
Lele54g0619 661 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 441 648 - -
Lele54g0619 661 MobiDBLite consensus disorder prediction 252 276 - -
Lele54g0619 661 ProSiteProfiles Protein kinase domain profile. 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0619 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 639 - -
Lele54g0619 661 Pfam Protein kinase domain 369 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0619 661 CDD STKc_IRAK 371 638 - -
Lele54g0619 661 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Lele54g0619 661 Gene3D Phosphorylase Kinase; domain 1 343 440 - -
Lele54g0619 661 SUPERFAMILY L domain-like 45 224 - -
Lele54g0619 661 MobiDBLite consensus disorder prediction 235 276 - -
Lele54g0619 661 SUPERFAMILY Protein kinase-like (PK-like) 369 635 IPR011009 -
Lele54g0619 661 FunFam Leucine-rich repeat receptor-like protein kinase 28 180 - -
Lele54g0619 661 Gene3D Transferase(Phosphotransferase) domain 1 441 654 - -
Lele54g0619 661 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Lele54g0619 661 FunFam pollen receptor-like kinase 1 338 440 - -
Lele54g0619 661 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0619 Lele-ChrLele54 13082314 13086566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0619 31 660 Receptor kinase-like Gene Family AT1G68400 65.062 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele54g0619 Pkinase 9.6e-39 CL0016