Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0604 ATGGAGGTTCCCTCCGCCGCTCCGGCCTCCTCCTCCACCCCTGCCTCTCATCTCAACTATCCCGACTCAGTTGATTCCTCCCCTCGCTCCCGGAACACTGATTCCTGGGACGAGTCTATCCCTCCGGCCGCCGCGGCTTCTGCCAAGCTTCGCTTCATGTGCAGCTACGGCGGTCACATCGTCCCTCGTCCCCATGATAAGTCCCTCTGTTACGTTGGTGGGGAAACCCGTATCGTTGTCGTTGAACGCCACACCTCCCTCGCTGACCTTTCCTCTCGTCTCTCTAATACCTTCCTCAACGGCCGTCCCTTCACTCTTAAATACTTGCTTCCCACTGAAGACCTCGATTCTCTAATTTCTGTAACCACCAATGAAGACCTTGATAACATGATCGACGAGTACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCCCGGCGAAACCCGATTCCGCCCAATCGATACCCGTAATTAGTAGCTCGGCGAAGTCTGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGGTGCTGGCAATCTGGATGGGGCTTCGAAAGATGTCGAGGCTGTGGGGTCTGGATCTTTTGGGAATGGCAAGAGTGCGAAGCAGCAGGGGCAAGATGTTCACTCTGTGCCCGATTCCCCTATGCTGGAAATCACATCTTCATTTGGGTCCACTTCTTCATCGCCGTCAGTGGCGAATTTGCCGCCAATTCGGGTTCATGCTGATGATGGTAGTGGTGGTGGAGCGAGGGCGCAGGATCAGAAGGCGGTGGGGATTGAGGAACAGCTTGCTCAAATGGGTATTGGTGGCGGACAGAAGCAGGATGAGGGTTTTCTGATGTCTTCACCTCCTACTATGCCAGCATCCACCGTCCCGGCTGCCGGTGTGCCCATTGGCTCCTCGGTCCTTCCAGGTGAATACCAGAATCGTGTTGTATCTGATGACGAGAGATCAGAGAGATCAGACCATGGAGTCCTTGGGGGTTATAGGAAACCTCCGACAGCGCAGCCACAGACGGTGCCTCAGCCGCAGATTCTGCAATCGCAATTGCAGCAGAAGCAGGATTTGCCTTCTCCTGATTCAGTTTCAAGTGACAGTAGTATGACAAATGCAATGTCACGTTCAAAACCTATGGTCTATCAAGACCAAGCTCAGCTCCAAATTCCCTCAGGAGCTACAAGGGTTCCTAGTAATCAGGTTGATCCGAAACTTACAATGTCTGATTCCCATGGACGGATCCAAATGCAACAACAAGTATTGGAACAGGGATATGTTTTGCAACAACAATTCGAACAGCAACAACAGCAGCACCAATTTATACACGGAACACAGCAACAAGTACAGGATGCAGGATATGTGTTGCAACAACAATTGGAACAGCAACAGCAGCAGCAGCAGCAACCTCCTCAACAGCAGCACCAATTTATGCACGGAGCACAGCAACAAGTACAGGAAGCGGGATATGTATTGCAACCTCAATTCGATCAACAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCCCCTTCCCAGGCCGTGCCACTCCCTGCATTCTATCCTGTATATCATTCCCAGCAGCAGCTTCATCCGCAGCATCAGCATCAGCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCACTAGGCAGACCCAACATTACAATTTGTCTGCACAGCAATCTAACATTAGCGAAACTGCTACAACAATTCCTTCTAGCCGTGCCCAAACAACACCAAATCCTGCAGCTTACAACCCCATCAGAAATGCTCCGGCAGCTAAATCCGAAATGCAAGCAGGTGCATATAGAACTGCAATTTCAGTCACCCCTCAAGTGGTTCAGGTTGCTTCTAGTCAGCCTCAGCAGCAATTTGTTGCCTATTCCCAGTATCAGCATCCATCTCAGGCTGTTGCCGCCAATTCTGCTGCCCCGGCTAGTTATGCTTATGAGTATGCCGATCCTGCTCATGCCCAGATATACTTTTCTCAGCCTCTGGCACCCACAATGGCTTCACAGTACCAAACCATGACAGGTGCTGCTGCTGCTGCAGAGCCTCCCTCGGACAGCATGAAGCAGCAAATAAGAACATCACAGCCACAGTAA 2190 0.5032 MEVPSAAPASSSTPASHLNYPDSVDSSPRSRNTDSWDESIPPAAAASAKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERHTSLADLSSRLSNTFLNGRPFTLKYLLPTEDLDSLISVTTNEDLDNMIDEYDRISNSSLKPSRIRLFLFPAKPDSAQSIPVISSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDEVGAGNLDGASKDVEAVGSGSFGNGKSAKQQGQDVHSVPDSPMLEITSSFGSTSSSPSVANLPPIRVHADDGSGGGARAQDQKAVGIEEQLAQMGIGGGQKQDEGFLMSSPPTMPASTVPAAGVPIGSSVLPGEYQNRVVSDDERSERSDHGVLGGYRKPPTAQPQTVPQPQILQSQLQQKQDLPSPDSVSSDSSMTNAMSRSKPMVYQDQAQLQIPSGATRVPSNQVDPKLTMSDSHGRIQMQQQVLEQGYVLQQQFEQQQQQHQFIHGTQQQVQDAGYVLQQQLEQQQQQQQQPPQQQHQFMHGAQQQVQEAGYVLQPQFDQQQQQFIHGTHFIHHAPSQAVPLPAFYPVYHSQQQLHPQHQHQHQLEQQYQVYYVPTRQTQHYNLSAQQSNISETATTIPSSRAQTTPNPAAYNPIRNAPAAKSEMQAGAYRTAISVTPQVVQVASSQPQQQFVAYSQYQHPSQAVAANSAAPASYAYEYADPAHAQIYFSQPLAPTMASQYQTMTGAAAAAEPPSDSMKQQIRTSQPQ 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0604 729 CDD PB1_UP2 53 152 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 325 405 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 220 258 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 1 37 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 705 729 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 365 405 - -
Lele54g0604 729 ProSiteProfiles PB1 domain profile. 49 154 IPR000270 GO:0005515
Lele54g0604 729 MobiDBLite consensus disorder prediction 335 351 - -
Lele54g0604 729 SMART PB1_new 64 154 IPR000270 GO:0005515
Lele54g0604 729 MobiDBLite consensus disorder prediction 1 39 - -
Lele54g0604 729 Gene3D - 69 153 - -
Lele54g0604 729 PANTHER OS05G0427100 PROTEIN-RELATED 19 497 - -
Lele54g0604 729 MobiDBLite consensus disorder prediction 215 276 - -
Lele54g0604 729 Pfam PB1 domain 65 153 IPR000270 GO:0005515
Lele54g0604 729 SUPERFAMILY CAD & PB1 domains 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0604 Lele-ChrLele54 12939492 12941847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0604 49 182 MAP Kinase Kinase Kinase AT3G46920 40.000 2.11e-24 107