LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g0597	ATGGAGAGAGCTTGTGAATTCTGCACATGTTTGAGGCCAGTGGTTTATTGTAAAGCTGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTTCATAAAGCCAATGCATTGTCCAGCCGCCATCTCAGAACTCTTATATGTAACCTATGTAGAAACCATTTTGCTTTTGTTCAGTGTTTGGATCACCAAATTTTGATCTGCCGTGGCTGCGATCAGAAGCTCCATGATCCCTCCTTAAAGCATCAGAAACGAGCTATCAGAAGTTATATGGGTTGCCCTTCTGCCAAAGACTTTGCAGTTCTCTGGGGTTTTGAATTAAATGAGATAGAAAACAGTGGTTCTGCAGATTTGAATGCAGTAAATCTCTTGGGAAAGTCCGGCAATCAAACTGGAGGCAATTCAATGGTGTCTGAAGCCAAATTTGGTGGAGGATCTAGCAGTCAACAAGGTCAGAAATTGTATAAAGATCAAGAGAGACAAATTATTCTGCAGCAGATTGTTGATTTGAAAAGGCTTCAGATCTGTGAGAATAGTAAAAATTCTGCACCGTTAAATGGGCTGCAAGGAATAGTATCATCTTCTTCAATGTATCATACTCGAAAGAACTATGATGAAAAATGTGATCAGCATGCGCAAGATCCCCAGGATTTTAATAATAATCTTCAGGAAAGAGACAGTCCCATGGCAGATATGAAGCTTGAAAGTTTGTCATCCACATTTTCTGAACTTGTTAATTTACCTTCATCTCCAGTAATAGACCTTCCCTTAAACAACGAGTTCGTTTGGACATGCAAAAGTCCACTTCAAAGTAATCAGTTGTGGTTTCATAATATTCAAGACCTTGGGATATGTGAAGAACTAATCTGTCAAGATGATTTTAACATACCTGACATTGACTTAACATTCCAAAACTTTGAAGAACTATTTGGAGGAGATCAAAATCCAGTTAGAGGACTGGTTGGTGATAATGACGTGTCCTGCTCTTCTATAGACAAGGATATATCACTTGATAAGTCAGATATCTCCAATGAAAGAACAGTGGAGGATTCTTTGGAAGCCGTATCCATTGCTATCTCGCAGTCTGCTAATGAGGACAAAGATATTTCTCCTCCAAACCAATTTAACCCTAAAAGCAGTTGTACTGATCACCATGACCCCCGTCTTTCTTCTCACAGTGAATGGAAAGGAAATTGTAGCTATTTCCCAGAACAGGAAGTTTCAAACATGGAGACTGGAGGAAATGACACTGTGAGGATTAAAGAAAAGAAATCTCAACAGCGTGAAAAGCAAGCTCGAGGTCAAACCAGGAAACCGGGGCCTAATGTAAGAAAGAGGATCAAAGGCCAAACTGCCAAAGCAGAAAGCTATTGA	1374	0.3974	MERACEFCTCLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLICNLCRNHFAFVQCLDHQILICRGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIENSGSADLNAVNLLGKSGNQTGGNSMVSEAKFGGGSSSQQGQKLYKDQERQIILQQIVDLKRLQICENSKNSAPLNGLQGIVSSSSMYHTRKNYDEKCDQHAQDPQDFNNNLQERDSPMADMKLESLSSTFSELVNLPSSPVIDLPLNNEFVWTCKSPLQSNQLWFHNIQDLGICEELICQDDFNIPDIDLTFQNFEELFGGDQNPVRGLVGDNDVSCSSIDKDISLDKSDISNERTVEDSLEAVSIAISQSANEDKDISPPNQFNPKSSCTDHHDPRLSSHSEWKGNCSYFPEQEVSNMETGGNDTVRIKEKKSQQREKQARGQTRKPGPNVRKRIKGQTAKAESY	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g0597	457	ProSiteProfiles	Zinc finger B-box type profile.	43	87	IPR000315	GO:0008270
	Lele54g0597	457	MobiDBLite	consensus disorder prediction	362	457	-	-
	Lele54g0597	457	MobiDBLite	consensus disorder prediction	416	435	-	-
	Lele54g0597	457	MobiDBLite	consensus disorder prediction	393	415	-	-
	Lele54g0597	457	PANTHER	ZINC FINGER PROTEIN CONSTANS-LIKE 10	4	455	-	-
	Lele54g0597	457	MobiDBLite	consensus disorder prediction	362	380	-	-
	Lele54g0597	457	CDD	Bbox1_BBX-like	4	47	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g0597	Lele-ChrLele54	12875036	12878047	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele54g0597	1	333	C2C2-CO-like Transcription Factor Family	AT1G68190	36.994	6.41e-63	206