Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0595 ATGGGATTACAGAACAATCTCCACGACGTCTCTTCCGATTCCATTCCCCTCCTCCTCCTCCTTCACATCGCCGCCGGCCTCAATTACCTTCGCTCCTTCCTATTCTCTTTCCTCCACTCTCTCGGCCTCTCCAGTTTCCACTCCCACACGCCTGCTATCGTTGACGATGCCCTCCTCGCCGCCGTCGGATCCGGCCTCGCCCGCCTTGTGATTCTTTCCGACCAACTCCACGCCACCAACTGTGATCTTACTGACGACGACCGCGAGATTGCCGCCTCCTCCTCCATGTGCGTTGTGTGCCGGAGCTACTATAGGGAAGGCGACCAGGTAAGGAGGCTTCCCTGCCGCCACGTCTTCCATAGACGCTGCTTTGATGCTTGGCTTCACCAGCTCAAGTTTAATTGTCCTCTCTGTCGATCGGCTCTCGTTTCCGACGAACGCGTGGCCCTTGCAGAGCGGCGCGTTGGTACCGAAGTCTTATCCTGGTTCTCTGTTCGGCGACACGACGACGTTTCACTCCCGTAG 525 0.5771 MGLQNNLHDVSSDSIPLLLLLHIAAGLNYLRSFLFSFLHSLGLSSFHSHTPAIVDDALLAAVGSGLARLVILSDQLHATNCDLTDDDREIAASSSMCVVCRSYYREGDQVRRLPCRHVFHRRCFDAWLHQLKFNCPLCRSALVSDERVALAERRVGTEVLSWFSVRRHDDVSLP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0595 174 Pfam Ring finger domain 96 139 IPR001841 -
Lele54g0595 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 154 IPR013083 -
Lele54g0595 174 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Lele54g0595 174 SMART ring_2 97 138 IPR001841 -
Lele54g0595 174 PANTHER RING ZINC FINGER PROTEIN-RELATED 32 151 - -
Lele54g0595 174 SUPERFAMILY RING/U-box 96 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0595 Lele-ChrLele54 12834206 12834730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0595 1 165 C3H Transcription Factor Family AT1G15100 48.485 8.51e-43 138