Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0589 ATGAGCTCCGTCATGTTTGCTGGAAAAGATGTTTTAGGTTATGTTTTTAGCAATGATGGGGATGTTGTGGACTATTTTACAGATATGGTTCCTCTATGTTACTCTGATTGTTTTTTAATGGGAATTGGTTGGCAATACTTAGGGGCATATGTGAACCTTGGATCTTACTATGTTCTTGGAATTCCAATAGTTGCAACATTGAGTTTCTGGGTGGGCTTGAAAGCAAGAGGACTTTGGATTGGAATAACGATTGTCAAACAAGTTCTTCTGAGAATGAAAAGTAACAATTATGCGAATTCTCAGGGTGCTCTTGTTGCCCGTGGTGCTCCTTTGTCCATTGTCAACAAAAGATGCGGATCCGGATCGACCCGAGTTTCCAGAGACCAGAACTACGGAGCTTCAAGTGAGGAAGGACATTGGGAACAGTACAGGTCGCTTGCATCTCGAACATTGGAACCAATGGGGCGAGAAAGTCACAAAATGAAAGCTTTAAGCTTGCTGAGAAGTAGAATCTGTGACCCCAAATTTATATTCAAGCCTCTCCACGATTCTCCGGACAGCAACTACAGTAAACTGAAATTCATGATATCAAGTTCAATTACTGAGGCATGCAATAATTCTATTCTGCTTCTTGGTCCCCGTGGCTCTGGGAAATCTGCGGTTCTGGAGCTTGTTGTTGGAGATTTATTGGCGGAGTATCCGGACATGATTTCAGTGATCAAGTTGAGTGGGCTTTTACATAGCGATGACAACTGTGCATTGAAGGAAGTAGCTAGGCAGTTATGCATGGAGCATCAATTGCAATTCTCAAAAGCGGCATCATTTGATGACAACTCTCAATTCATGGTAGCCATGCTAAAGGAGTGTGGATTAGCTCATAAAACAATTGTATTTATTCTGGATGAGTTTGACCTGTTTGCCCAGGGTAAGCAGAGGTTGCTTTATAGCTTGCTAGATGCTATGCAATCAATAACATCACAGGCTGTTGTCATTGGCATTAGTTGTCGGCTGGACGCGGATCAGCTATTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGAAAGTTATTGTTCCTTCCACCTTCTATGGAAGACTCAAAGAGAATTTTGGAGCAAGTACTGTCTTTACCGGTGGATTCAAGCCTTCCACATGATTATGCTGTTGAATTTAATAGAAAAGTTCAAGATATTTTTGAAGATAGAAGGTTCAAAGAAACCTTCAATAAATACTTGAATTTTGCCTCCTCAGTCAAACATTTGCTGAGATTTTGTGCTGTTTCTTGTATGGATTTGCAAAGTGGCTTTTTGACATACGAGAACTTTGAAACTGCATTCTCAAGTATTCTCAGGCAACCCAAACTGGAATGTTTAAAAAATTGCTCCATATTAGAACTTTACATCCTGGTTTGCATGAAGAGGTTGGAAGTTAAAGAACAGACCTTGTGCAACTTCAATTCTGTGATGAAAGAGTATAAAAAAGTACATGATTCCTTCCAGAGTTCTGATTATTATGCACGAAAAGTCTGCTTAAGGGCATTTGAACATCTTATAAACCGTGAACTGATATGTTTCACAGACAATAGAGGAAATAGTTCATCTGTGGAATTCCGCCCTGTAAAGCTTTTGATCTCTTCTGCTGAGCTACACCAAGGACTAAGAGCATATCATTCATGCCCTGCTATTCTTCATAAGTTAATGGATCGGGAAGGCTAA 1713 0.4016 MSSVMFAGKDVLGYVFSNDGDVVDYFTDMVPLCYSDCFLMGIGWQYLGAYVNLGSYYVLGIPIVATLSFWVGLKARGLWIGITIVKQVLLRMKSNNYANSQGALVARGAPLSIVNKRCGSGSTRVSRDQNYGASSEEGHWEQYRSLASRTLEPMGRESHKMKALSLLRSRICDPKFIFKPLHDSPDSNYSKLKFMISSSITEACNNSILLLGPRGSGKSAVLELVVGDLLAEYPDMISVIKLSGLLHSDDNCALKEVARQLCMEHQLQFSKAASFDDNSQFMVAMLKECGLAHKTIVFILDEFDLFAQGKQRLLYSLLDAMQSITSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSKRILEQVLSLPVDSSLPHDYAVEFNRKVQDIFEDRRFKETFNKYLNFASSVKHLLRFCAVSCMDLQSGFLTYENFETAFSSILRQPKLECLKNCSILELYILVCMKRLEVKEQTLCNFNSVMKEYKKVHDSFQSSDYYARKVCLRAFEHLINRELICFTDNRGNSSSVEFRPVKLLISSAELHQGLRAYHSCPAILHKLMDREG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0589 570 Pfam AAA ATPase domain 190 326 IPR041664 -
Lele54g0589 570 Gene3D - 186 360 IPR027417 -
Lele54g0589 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 376 IPR027417 -
Lele54g0589 570 CDD AAA 206 354 - -
Lele54g0589 570 FunFam Origin of replication complex subunit 4 186 360 - -
Lele54g0589 570 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 369 550 IPR032705 -
Lele54g0589 570 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 160 569 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0589 Lele-ChrLele54 12748822 12761411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0589 154 567 Core DNA Replication Machinery Family AT2G01120 64.303 0.0 568