LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g0584	ATGTTCTCAAATTTGTTTTCCGTGTTCATTGTTCGCCGTCTATCTACCAGTACGAAGCTTCCGAATATTTCAAAAATCAACTCTAGCAAGAACTCTCCTCTTTCGCTTGCTAGTCTCATAGCAAAGGTAGATTTTTCAGCTATCACTTTCTCAAAAAATATCAAGAAATTCCTCAGGCACCACTCCATTAACGAGTTTGAATTTTTCTTTGAAAGCATTGGCATAGACTATAATGACGTTTCTGGGTTGTTGCCTACGAACAAGTTTTTCTTTTCCGAAGACCGGACTATTCTCGATGCTGGTGCGCTTTCGGAATTGGGGTTTCCGTGGAATGAGTTGGGTAAGTTGTCTGTGGAGAATAGTTCCATATTTAGGTGTAGTGCGGGGGAGCTCAAGTCTAAGCTATCGGAGTTTAAGAAATATTGTTTTTGTAATGTTCATTTAGTTGGTATATGTTTGGCTTTCCCTTATGTTTTGAGCGGGGGATGTGAAGTAGGTGCTAAAAGTGAAGCATCGTTAAGTTTTCTGAAGTTGTTATTTTTGGATTTTAACGTGGCATTATCCGTTGAGGAAAATGTGAATTCCTGGTACGAGGATGTCAATCAAAAGTATGATCATGTATTGGGGACGAACAAAATCGCTAATCTGCCTCAGGTAATGAGGGCTTTGGACTTACAAGAATGGTTCTTCAATAAAATCAAGGATGGAAATCATCAGTTGCTAATGAAATATATAGCAAGCTATCCTGATGAAGACCGACCTGAAGAACACCAAAGTGGCTTGGAGATGATTCAAGTTTCGAGGACCCCAAATCACACCATGAGTAAACTAAATTTGTTGCATAGGCGGGGCTTTGGGGAAAATGCTTTAATCTTTGATCTCTTAGCATACTTGCATGGCACTAGTATTGAATTAAAGGAAAGATTCGATTGCCTTCTGGATTCAGGGATTGAATACTCCAAGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCCTAAACCAAAATGATCAATCTTTAGAGCAGAAGGTGAGTTTCCTCTGTCAGGGAATGGGATGCTCTTTAGAGTATCTACATACATATCCAGGTTATTTGCTTTTTGGTTTAGAGAACCGCATTAAGCCTGGGTACAGATTTCATAAGTGGCTTGCGGAAAAGGGTCTATGTACCATAGACTATTCCATTGCAAGCTTAGTTGCAACTAGTGAAAAGGCTTTTCTAGCTTGTGCTTACAAAATTCACCTAGCTTCTCCAAAACATTGGTTTGAGCAATTCCGGTTCTAA	1284	0.3949	MFSNLFSVFIVRRLSTSTKLPNISKINSSKNSPLSLASLIAKVDFSAITFSKNIKKFLRHHSINEFEFFFESIGIDYNDVSGLLPTNKFFFSEDRTILDAGALSELGFPWNELGKLSVENSSIFRCSAGELKSKLSEFKKYCFCNVHLVGICLAFPYVLSGGCEVGAKSEASLSFLKLLFLDFNVALSVEENVNSWYEDVNQKYDHVLGTNKIANLPQVMRALDLQEWFFNKIKDGNHQLLMKYIASYPDEDRPEEHQSGLEMIQVSRTPNHTMSKLNLLHRRGFGENALIFDLLAYLHGTSIELKERFDCLLDSGIEYSKLCKMVRMTPKILNQNDQSLEQKVSFLCQGMGCSLEYLHTYPGYLLFGLENRIKPGYRFHKWLAEKGLCTIDYSIASLVATSEKAFLACAYKIHLASPKHWFEQFRF	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g0584	427	PANTHER	CGI-12 PROTEIN-RELATED	21	408	IPR003690	GO:0003690\|GO:0006355
	Lele54g0584	427	Gene3D	Transcription termination factor 3, mitochondrial	229	425	IPR038538	-
	Lele54g0584	427	Gene3D	Transcription termination factor 3, mitochondrial	39	189	IPR038538	-
	Lele54g0584	427	Pfam	mTERF	305	407	IPR003690	GO:0003690\|GO:0006355
	Lele54g0584	427	SMART	mt_12	355	389	IPR003690	GO:0003690\|GO:0006355
	Lele54g0584	427	SMART	mt_12	323	354	IPR003690	GO:0003690\|GO:0006355
	Lele54g0584	427	SMART	mt_12	114	145	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g0584	Lele-ChrLele54	12671662	12673310	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Lele54g0584		mTERF	2.7e-14	No_clan