Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0544 ATGATCGGTTATTGTGATTTGAAAAAAATAATAATGAGTTCCAAAGATGTTGACACAGATTGCCTTGGATGGGCAGCAAGAGATGCCTCTGGAGTTCTATCCCCATACCAATTCAGTCGCAGGACTCTAGGGAACGATGATGTTTTGGTAAAAATTACACATTGTGGAGTTTGTTATGCTGATGTAATTTGGACAAGGAATAAACTTGGTGACTCAAAGTATCCTTTAGTACCTGGACATGAGATTGCTGGAATTGTACAAAAGATTGGTTCCAACGTCCATCGTTTCAATGTTGGTGATCATGTTGGAGTAGGAACTTATGTTAATTCATGTCGGGATTGCCAATATTGTAGTGATAGATTAGAAGTTCATTGTGTGAAGGGATCAGTTAATACTTTTAATGGGGTTGATGTTGATGGCACAATCACAAAAGGAGGATACTCTAGTAACATAGTGGTCCATGAAAGGTATTGCTTCATGATACCCAAAGAGTATCCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCTGGTATTACTGTCTATTCTCCTATGGTGCGCCACAAGATGAATCAACCCGGTAAGTCCCTAGGAGTGATTGGCCTCGGTGGCCTTGGTCATATGGCGGTAAAATTTGGGAAGGCTTTTGGGTTGAATGTAACAATTTTCAGCTCAAGTGCATCCAAAAAAGAGGAGGCCTATGAGCTGCTTGGTGCTGACAACTTTGTTGTTTCCTCTAACCAAGAGCAGATGATGGCATTGGCCAAGTCTTTTGACTTCATAGTTGACACAGCATCTGGTGATCACCCGTTTGATCCATACATGTCACTTTTGAAGACCTCAGGGGTATTAGTCCTAGTTGGGTTCCCAAGTGAGGTTAAATTTAGCCCTGGAAGCCTTAATCTGGGAATGAGAACTATCTCTGGAAGTGTTACAGGGGGTACAAAGGAGACACAAGAGATGATTGATTTCTGTGCTGCAAATAGAATTTACCCAAACATAGAAGTGATTCCGATTGAATACATAAATGAAGCTCTTCAGAGGGTAATAAATAAAGATGTGAAGTATAGGTTCGTGATAGATGTTGAAAACTCCTTAAAGTAG 1101 0.4078 MIGYCDLKKIIMSSKDVDTDCLGWAARDASGVLSPYQFSRRTLGNDDVLVKITHCGVCYADVIWTRNKLGDSKYPLVPGHEIAGIVQKIGSNVHRFNVGDHVGVGTYVNSCRDCQYCSDRLEVHCVKGSVNTFNGVDVDGTITKGGYSSNIVVHERYCFMIPKEYPLASAAPLLCAGITVYSPMVRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTIFSSSASKKEEAYELLGADNFVVSSNQEQMMALAKSFDFIVDTASGDHPFDPYMSLLKTSGVLVLVGFPSEVKFSPGSLNLGMRTISGSVTGGTKETQEMIDFCAANRIYPNIEVIPIEYINEALQRVINKDVKYRFVIDVENSLK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0544 366 CDD CAD1 23 360 - -
Lele54g0544 366 FunFam Putative cinnamyl alcohol dehydrogenase 6 332 361 - -
Lele54g0544 366 FunFam Cinnamyl alcohol dehydrogenase 176 331 - -
Lele54g0544 366 Gene3D - 24 361 - -
Lele54g0544 366 Pfam Zinc-binding dehydrogenase 203 325 IPR013149 -
Lele54g0544 366 Pfam Alcohol dehydrogenase GroES-like domain 46 159 IPR013154 -
Lele54g0544 366 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 196 223 IPR029752 -
Lele54g0544 366 SMART PKS_ER_names_mod 31 359 IPR020843 GO:0016491
Lele54g0544 366 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Lele54g0544 366 SUPERFAMILY GroES-like 27 194 IPR011032 -
Lele54g0544 366 Gene3D - 176 331 - -
Lele54g0544 366 PANTHER ALDEHYDE REDUCTASE 19 364 - -
Lele54g0544 366 FunFam Uncharacterized protein 24 175 - -
Lele54g0544 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 329 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0544 Lele-ChrLele54 11889185 11891922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0544 13 366 Monolignol Biosynthesis Gene Families AT1G72680 74.294 0.0 544