Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0505 ATGGGAAATTGCAGCGGCGTAGCCTCCGGGCATAGCCAACCGGGGAACTCCGGCGCCACCTATTCCGGCCGGCCTCCTCACCAACGCAACAATGGCATCACCGTCCTCCCTCCTGATTACAACCCCTCTCGTCCTCCTCCACCACCTAAACATGTCCTTTCTTCTGTCGTCGGACGCGTCCTTGGCCGACCCATGGAGGACGTGCGTACCACACATATCTTCGGCCGCGAACTCGGTCGTGGTCAATTTGGTGTCACCTACCTAGTCACTCACAAAGTCACTAAAGAACAATTCGCCTGCAAATCCATCGCCACCCGCAAACTGGTTAGCCGCGAGGATTTGGAGGACATTCGCCGCGAGGTCCAGATCATGCACCACCTCACTGGTCATCGCAACATTGTTGAGCTTAAGGGAGCTTACGAGGATCGCCACTCTGTTAATTTAATCATGGAGCTTTGCGCTGGCGGGGAGCTATTTGATAGGATTATAGCTAAGGGGCACTACTCGGAGCGAGCCGCATCGGACTTATGTCGGCAGATCGTGACGGTAGTGCATGATTGTCACACCATGGGAGTTATGCATAGAGATTTGAAGCCTGAGAATTTCTTATTCCTCAGTAAGCAGGAGAGTTCACCTCTTAAGGCAACTGATTTCGGCCTCTCCGTGTTCTTCAAGCCAGGAGATGTATTTAAAGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTACTGCGTAGAAGCTACGGACCTGAAGCTGATATTTGGAGTGCCGGGGTTATATTATACATTCTTCTCTGCGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGGTATCTTCGATTCAATTCTTCATGGGCATATTGACTTCGCATCAGATCCTTGGCCCTCCATTTCAAGTAGTGCCAAAGATCTCATCAAAAAGATGCTTCAATCTAACCCAAAAGAAAGGCTTTCAGCAGTTGAAGTCCTTAATCATGCTGGGATGAGAGAAGATGGGGATGCATCTGATAAGCCGCTTGATATTACTGTTCTAACCAGAATGAAACAATTCCAGGCAATGAACAAGCTAAAAAAAGTTGCTTTGAAGGTAATTGCAGAAAATCTATCTGAAGAAGAAATCATTGGCTTAAAAGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATAACTTATGATGAGTTAAAAGCTGGTCTCCACAAACTGGGCAGTAAACTTTCTGAGTCTGAAATAAGGCATTCAAAGAAACATCCCATTCCCTGTACAATAAATTCCCTGAATAAGCTCACAGAAAGGATGATTGTCCACATTATTCCTCATAATCAGATTAAAGCCTTGGGCATTATCAGTGTACACTTTAATATTTCTAAGACCCATAGTCCAGCAGATATTCAGACCAATGAGTTATTTCACAAACTCTTGCTGGCTATTCCTTTTTATCTGACTTCCCTTGCTCTTTCTTGTCATACTGTTGCAGCTAAACAGTATTCTTCTGTCTTGTTAAGCTCTATAATAGCTTGA 1530 0.4549 MGNCSGVASGHSQPGNSGATYSGRPPHQRNNGITVLPPDYNPSRPPPPPKHVLSSVVGRVLGRPMEDVRTTHIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLVSREDLEDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAASDLCRQIVTVVHDCHTMGVMHRDLKPENFLFLSKQESSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLCGVPPFWAENEQGIFDSILHGHIDFASDPWPSISSSAKDLIKKMLQSNPKERLSAVEVLNHAGMREDGDASDKPLDITVLTRMKQFQAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYDELKAGLHKLGSKLSESEIRHSKKHPIPCTINSLNKLTERMIVHIIPHNQIKALGIISVHFNISKTHSPADIQTNELFHKLLLAIPFYLTSLALSCHTVAAKQYSSVLLSSIIA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0505 509 SUPERFAMILY Protein kinase-like (PK-like) 73 331 IPR011009 -
Lele54g0505 509 SMART efh_1 377 405 IPR002048 GO:0005509
Lele54g0505 509 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Lele54g0505 509 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0505 509 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0505 509 Gene3D Transferase(Phosphotransferase) domain 1 158 337 - -
Lele54g0505 509 Pfam EF hand 378 404 IPR002048 GO:0005509
Lele54g0505 509 SUPERFAMILY EF-hand 356 415 IPR011992 -
Lele54g0505 509 MobiDBLite consensus disorder prediction 1 51 - -
Lele54g0505 509 FunFam calcium-dependent protein kinase 1 158 337 - -
Lele54g0505 509 CDD STKc_CAMK 73 327 - -
Lele54g0505 509 Pfam Protein kinase domain 75 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0505 509 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Lele54g0505 509 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Lele54g0505 509 FunFam Calcium-dependent protein kinase 1 74 157 - -
Lele54g0505 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 427 - -
Lele54g0505 509 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Lele54g0505 509 MobiDBLite consensus disorder prediction 1 37 - -
Lele54g0505 509 CDD EFh 378 414 IPR002048 GO:0005509
Lele54g0505 509 Gene3D - 338 419 - -
Lele54g0505 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0505 Lele-ChrLele54 7746883 7750663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0505 58 416 EF-hand Containing Proteins AT4G23650 79.944 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele54g0505 Pkinase 3.2e-71 CL0016