Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0492 ATGGTACCATCGTCAGCTGGATTCTGCTACTCCGAGGTATCAGCACCGGGCAATAACCCGGCGACGGCGATCCAGACCCATATGGGGAATCATCGTCATCATAATCAGATCCAAGGGTTTGAATCCGACCCAGATATGTACAACCTCACAACCAGCATGGACATGATTGGCTTCTCCAAGAATCTTCACCAGCAACAGCAAAGTGATTGGAAAAGCTTTCTGGGTAAACCCGCAACCCATCACCACAATCCGGGTCCTTCTTCTTCTTCTTCTTCCAAGACGACCACCATGAATAATAATAATAATGAGTCTGGTTCCACCAATTTCTATCAGTACAACACCAAACAAGATTTCACATCCAACGAGAATCTGATTGTAGGAGAACCTCATAACCATCATCATCAACAACATGATTCTTCCTCTACCACTTGGCAAGATAGCAGATTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAAGGCCAAGTCAAGGCCTTTCGCTCTCTTTGAGTTCTAACAATCCCTTAAGCATTGGGTTACAATCTTTTGAACTAAGACACACCACCACCAATAACAACAACCACCTTCATCATCATCAGAACCAATCAGATTTTGTTTCTTCAACTAGTTCTGGAGACAAGTTATTGTTGGGGAAATCATCAATGAATCTTCTTCATCAACAACAAGAAGAAGCTGCTGGGAATCTGTATCAAGGCCATTTTCTACTTAAGAACTCAAAGTATTTGGTCGCTGCACAGGAACTTCTCAACGAGTTTTGCAGTCTGGGAACGAAGCAAAGTGACTTAGTGAAGCAAAAGTCATCATCAACAAGTCTGAAAAACAAACAGTGGGTAGATGATAACGGAATCGGTCCCTCCAAGAAGCATCCCGTCGGCTCTCTAGAATTCATCGAATTACAGAAGAGAAAGACCAAACTACTCTCCATGCTTGAAGAGGTTGAAAGGAGATACAGGCACTACTGCAACCAAATGAAGGTGGTGGTGTCGTCGTTTGAGGCCGTGGCCGGGGCCGGGGCGGCGAGGGTTTACTCGGCGTTGGCGTTGACGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATCTTGAATCAAATAGAAGTAGCAGGAAGAGGAATGGGAGAGAAAGATCCCGTTGCACCAGGAACTACAAAAGGTGAAACGCCAAGACTCAGAATCATAGACCAATCTCTCAGACAACAGAGAGCTTTCCAACAAATGAGCATGATGGAAACTCATCCATGGCGTCCCCAAAGAGGCCTTCCAGAACGATCCGTTTCAGTTCTTCGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAATCAAGGAGCATGAAAACAACATGGCTTCCCCTGAGGGGGTCACCGATCCCGCCGTCGACGACAACATGCTGGCCGCCGGCAGCTGGAACCTCGATAACCCGCCACTGACGACTCCACGTCTTGTAGATCAGAAGCCGCTCCAGAACCACCGGTTGCTTCGAATAGACTCCGAGTGTGTGTCTTCTATCATAAACAACCACCCATTATCAGCAGATAACAAAAATGAATCCACCAAGAACAATAATAATCCCCATCATCAAGATCAATTTGGATCTGTGGAGCTTGATTTTTCATCTTACAACACTCACAACTCAGCTGGTGGTATGGTTTCTTACAGTAATGAGAATGGGAATAATAGTAATCAGAACTATAATAGTGGAGGAGGTGGCGGTGTTTCGTTGACGCTAGGGTTACAACAACACGGCGGAAGTGGGGTGAGTCTGGCGTTTCCTCAGGCGTCTCAAGCATCACTGTTCTATCCAAGAGATCAAATGGAAGATTGTCAACCAGTTCAGTACTCGCTTTTGGACGGCGATGCACAAAATCTTCCTTACAGAAATTTAATGGGTGCACAGTTGCTCCATGACTTGGCAGGCTAG 2091 0.4572 MVPSSAGFCYSEVSAPGNNPATAIQTHMGNHRHHNQIQGFESDPDMYNLTTSMDMIGFSKNLHQQQQSDWKSFLGKPATHHHNPGPSSSSSSKTTTMNNNNNESGSTNFYQYNTKQDFTSNENLIVGEPHNHHHQQHDSSSTTWQDSRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRHTTTNNNNHLHHHQNQSDFVSSTSSGDKLLLGKSSMNLLHQQQEEAAGNLYQGHFLLKNSKYLVAAQELLNEFCSLGTKQSDLVKQKSSSTSLKNKQWVDDNGIGPSKKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYCNQMKVVVSSFEAVAGAGAARVYSALALTAMSRHFRCLKDGILNQIEVAGRGMGEKDPVAPGTTKGETPRLRIIDQSLRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEIKEHENNMASPEGVTDPAVDDNMLAAGSWNLDNPPLTTPRLVDQKPLQNHRLLRIDSECVSSIINNHPLSADNKNESTKNNNNPHHQDQFGSVELDFSSYNTHNSAGGMVSYSNENGNNSNQNYNSGGGGGVSLTLGLQQHGGSGVSLAFPQASQASLFYPRDQMEDCQPVQYSLLDGDAQNLPYRNLMGAQLLHDLAG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0492 696 MobiDBLite consensus disorder prediction 563 587 - -
Lele54g0492 696 Coils Coil 309 329 - -
Lele54g0492 696 Pfam Associated with HOX 249 375 IPR006563 -
Lele54g0492 696 ProSiteProfiles 'Homeobox' domain profile. 425 488 IPR001356 GO:0003677
Lele54g0492 696 SUPERFAMILY Homeodomain-like 429 494 IPR009057 -
Lele54g0492 696 MobiDBLite consensus disorder prediction 74 110 - -
Lele54g0492 696 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 130 513 - -
Lele54g0492 696 FunFam BEL1-like homeodomain protein 4 431 493 - -
Lele54g0492 696 Gene3D - 431 493 - -
Lele54g0492 696 SMART HOX_1 428 492 IPR001356 GO:0003677
Lele54g0492 696 Pfam Homeobox KN domain 445 484 IPR008422 GO:0003677|GO:0006355
Lele54g0492 696 SMART prehox3 243 377 IPR006563 -
Lele54g0492 696 MobiDBLite consensus disorder prediction 82 110 - -
Lele54g0492 696 CDD homeodomain 428 489 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0492 Lele-ChrLele54 5847074 5849908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0492 117 695 Homeobox Transcription Factor Family AT5G41410 44.657 1.36e-136 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele54g0492 POX 1.4e-45 No_clan