Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0482 ATGGATGGGAGTGAAGCTATGGCATTCTCTGGTGGCTCAGCTCCATATTACATGCGTAGAGGAAATATTTCTGGGTCTGGCTCTGGAACACAAGCCCAGGGGTTCCAACAACCACCTCCTGGGTATAGACCTTTGTCAAACGTTAGCTTTCAAGCTCAGCCGAATGTCCGAGGTGGTTCTGTGGGTTCCACATTTTCGGTAGAGTCTCCTCGTAGCAGTTTTAGTCCAGGCATTAACATAAGTGCCTCTACCGGAGTACCTTCTTCGGGAGAACCCTTGAAAAAAAAGAGAGGAAGACCTCGTAAATATGGTCCTGATGGCCCTGTCTCTTTGGGACTTTCTCCCATGTCTGTAACTGCTAATTCTACCCCAGGTTCAGGCACACCTTCCCAGAAACGGAATAGAGGACGTCCACCTGGTTCTGGCAGGAAGCAGCAACTAGCTGCTCTAGGTGAATGGATGAACAATTCAGCCGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGGGAGGACATTGTAGCAAAGTTATTGTCTTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACAGTTTCTTCAGTCACTCTACGCCAACCGGCCTCAACAAACATCAGTGTTACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCTGGCTCATACTTGGTTGCTGAAGATGGTGGACCTTGTGATAGAACAGGGGGTTTGAGTGTTTCTCTTTCTAGTCACGATGGTCAAGTTATTGGTGGTGGTGTTGCTGTGCTTATCGCCGCAAGCCCAGTTCAGGTGGTAGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACAAGGCAAGTAACCTCTCCCAAGAGTGAGAAGAATTCCGAGACTCTGGCTCAGGCTCAGGCGCAGCATGATGGTAACAAGTTAAATAGCCGTATTACTCAAGCAAGTGCACAAAACTACACATTGTCTGCATCAGCCATGTGGCCAGGAGATCTGCAAAGTTCACACACACATACTCGTACTGGTATCGACTTGACTCGGGGCTGA 1059 0.4825 MDGSEAMAFSGGSAPYYMRRGNISGSGSGTQAQGFQQPPPGYRPLSNVSFQAQPNVRGGSVGSTFSVESPRSSFSPGINISASTGVPSSGEPLKKKRGRPRKYGPDGPVSLGLSPMSVTANSTPGSGTPSQKRNRGRPPGSGRKQQLAALGEWMNNSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASTNISVTYEGRFQILCLSGSYLVAEDGGPCDRTGGLSVSLSSHDGQVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTRQVTSPKSEKNSETLAQAQAQHDGNKLNSRITQASAQNYTLSASAMWPGDLQSSHTHTRTGIDLTRG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0482 352 ProSiteProfiles PPC domain profile profile. 159 297 IPR005175 -
Lele54g0482 352 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 60 322 IPR039605 GO:0003680
Lele54g0482 352 MobiDBLite consensus disorder prediction 1 145 - -
Lele54g0482 352 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Lele54g0482 352 MobiDBLite consensus disorder prediction 332 352 - -
Lele54g0482 352 MobiDBLite consensus disorder prediction 23 88 - -
Lele54g0482 352 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 282 - -
Lele54g0482 352 Gene3D - 164 296 - -
Lele54g0482 352 CDD DUF296 164 276 IPR005175 -
Lele54g0482 352 MobiDBLite consensus disorder prediction 114 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0482 Lele-ChrLele54 5592899 5596271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0482 1 352 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.705 2.74e-96 289