Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0469 ATGGCTATGAGCGAGAGAGAAATGTGCGAAGGACAAGAAGATGAACAGGAGCAGAACAATCTTTGGTGCGTAGAGGATCGATCCTGCAGAGAAATTAGAATGCCTCTTTTTGAAACTGAAGGCCATTATTTCCAGAAAATGGTGCCAGAGAACATGAAGAAACAACTTGCTTTAGCGGGGAGCAGCATCCAGTGGAGCTATGCAATATTCTGGTCTGCTTCTAGTAGCCAACCCGGGGTTTTGAAATGGGGTGAAGAATATTACAGGGGCGACATAAAGACTAGGAAAACAAGTCAGGCTGTACAACTTAGTTCTGACCAAATAGGTTTGCAGAGGAGTGAGCAGTTGAGAGAGCTGTTTGAGTCCCTTGCAACTGCAGAATCCGCCCCACAAATTAAAAGGCCTTCCACTGCACTACGCCCTGAAGACCTCTCAGATACTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCAATATTGGCCAGTCTACTCTACGTATCTTCAGTTCTGTTCTTGTTATCTATGTTTCTAGATTACCTGGACGAACTTTGGTAAATGGTCAACCTCTTTGGGTTTACAATGCCCCTTATGCTGATTGTACATTTTTTAGTCGCACTCTGCTTGCAAAGAGTGCATCCATTCAGGAGATTTTCCAAACAGTGAACCAAGTTCCATGCCTATGGCCTATAAATATAAGTTGCTTTGATAGAAATCCTATTAAGACAGACATTCTTGCTCTTTTCATCTCAACTTTCAGACTGTGGTATGCTTCCCTTTTCTGGAAGGTCTTGTTGAGCTTGGAACAAGTGCTTTGTTCAAATGCGATTGAAGCGAACCGACTGGCAGATGAGACACATATTGATGAAAGAGTAAATGATGGTGCTTCTCAGATGGCTTCTAGTGACTGTAGTTCTCGAACTCTTGCTGATCCTGAAAAGACTGCCTCTCGTCCCAATGATCAAAACCCAGTTGACCATTCTGCACAATACCTCCAAGAGTGCAATAAAACAAAAATGACCTCAAACGATCGTCAAAATGATGACTGGTATTATCAAAAAGTTATTTCTGCAGTTCTAAAAGACCCAGACCAGTTAGCTATTAGAGCACATTTTCAAAGTAGTGATAAGGAATTCAGCTTTGTTAGTTGTAAGAAAGGAGGATCAATGAGTTGTCAAAGGCTAATTAGAGGAGGAAACCCACAGAAGTTGTTGAAGAAGGTATTGTTTGAAGTTCTTCGGATGCATATGGACGGGTTTCTCGAGTATCAAGAAGAAAATGATTACAAAGAGAGAATGAGACCAGAGGTTGATGAAATTGGTATGAACCCTGTATTGTCAAAAAGAAGTGAAAAACTAAATGAAAGCCTTTTAAACCTTAGAGCAATGGTCCCTTCACTCGAGAAGAAGGTTAGAGAACTGGAAGCATGTAGCGAGCTAATAGATTTAGAAACCAAAGCTAAAAGAACACCTGAAGATATGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACCGATAATTGCACGAAGCCAATGAGTAACAAGAGAAAGCCAGTTAATATTGAAGAGACGTTGCAAGAGCATGATTCAGTTGCTCTAAATGACAGTTGTACTAGTTTATATGTATATCTTGATTCTTAA 1644 0.4033 MAMSEREMCEGQEDEQEQNNLWCVEDRSCREIRMPLFETEGHYFQKMVPENMKKQLALAGSSIQWSYAIFWSASSSQPGVLKWGEEYYRGDIKTRKTSQAVQLSSDQIGLQRSEQLRELFESLATAESAPQIKRPSTALRPEDLSDTEWYYLVCMSFVFNIGQSTLRIFSSVLVIYVSRLPGRTLVNGQPLWVYNAPYADCTFFSRTLLAKSASIQEIFQTVNQVPCLWPINISCFDRNPIKTDILALFISTFRLWYASLFWKVLLSLEQVLCSNAIEANRLADETHIDERVNDGASQMASSDCSSRTLADPEKTASRPNDQNPVDHSAQYLQECNKTKMTSNDRQNDDWYYQKVISAVLKDPDQLAIRAHFQSSDKEFSFVSCKKGGSMSCQRLIRGGNPQKLLKKVLFEVLRMHMDGFLEYQEENDYKERMRPEVDEIGMNPVLSKRSEKLNESLLNLRAMVPSLEKKVRELEACSELIDLETKAKRTPEDMVERTSDNYFNKTDNCTKPMSNKRKPVNIEETLQEHDSVALNDSCTSLYVYLDS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0469 547 PANTHER TRANSCRIPTION FACTOR TT8 273 528 - -
Lele54g0469 547 MobiDBLite consensus disorder prediction 296 326 - -
Lele54g0469 547 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 218 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0469 Lele-ChrLele54 5364229 5370063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0469 46 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 35.240 1.11e-81 265