Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0462 ATGAGGAGAGTGTGCAGTACTGGAGATTTGCAAAACATACAAGAAACTCAGACATCACACATGGAAGAAACAACCTTTAAAGTTGGACGTTACAGTGCCCAAGAAAGGAAAGAGAGAATCTCTAAATACAGGGCCAAGAGAAGCCAAAGGAACTTCAACAAAACCATCAAGTATACTTGCAGAAAGACACTTGCTGATAACAGAACTCGTATACGTGGAAGATTCGCAAGAAACGACGAGACCATTGAGATCGCGAATCCGATGATATCATTTTCGAACAGAGATGAAGACAAAGATGTTTTCTGGATTGAAGGATTAAATGAAGAGCTAGAGGATGAGACAGTGAGAGCACAACAGTATGTGAATAGCTTCGGAGCTTACTCAGAGTTTCAGTACTAG 399 0.4085 MRRVCSTGDLQNIQETQTSHMEETTFKVGRYSAQERKERISKYRAKRSQRNFNKTIKYTCRKTLADNRTRIRGRFARNDETIEIANPMISFSNRDEDKDVFWIEGLNEELEDETVRAQQYVNSFGAYSEFQY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0462 132 Coils Coil 103 123 - -
Lele54g0462 132 Pfam CCT motif 36 78 IPR010402 GO:0005515
Lele54g0462 132 ProSiteProfiles CCT domain profile. 36 78 IPR010402 GO:0005515
Lele54g0462 132 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 108 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0462 Lele-ChrLele54 5210117 5210882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0462 18 83 C2C2-CO-like Transcription Factor Family AT5G24930 42.424 9.79e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele54g0462 CCT 3.4e-17 CL0281