Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0440 ATGTTCAGCGCGTCCATATCATGTAAAGCCAAATTTCATTGCACGGAGCTTTCTCTAGCACAAACTCATTCCCTTCAACCCGTCCTCTTCTCTTTCCCACTTCTACATCTTCGACCCCTTTCGCTCTCAAATGCGTCCTCATTCTTCAAGTTTCAAGTGAAAATCTTCTCTCTGAGCTCAAAAAGCATTGTTCAATCCGAAACAATGGGCAAGGCATCCAAATGGTTTCGCTCTGTTTTTGGTCTCAAGAAGTCAGAATCTCCGTCTTCGCCGGCGCCGTCTCCGTCGACTCTACACCCTGGCTTAGCTTCAAAACCACTCAAAGACAAACGCCGGTGGAGCTTCGTCAAGTCTTACAGAGAATCCGGCACTAGTAAATCCTCCGACGTTCGCCACACAGCGTTCAGAGAGGAAGCGGTTCCATCGTCCGGACACATCGACGGCGTGTACCCTGACAAGCACATAATGACGGTTGCTGCTGCTAAGGCTGCTGTTGCGGAAGCGGCTGTGGCCGCTGCTCAGGCCGCCACCGCCGCCGCTTTCAGACTTACGAGCAGCGGCTGGTGCCCTGGGAGCTTCGGGACTCGTGAGGAATGGGCAGCCATCAAAATTCAAGCCGCTTTTCGAGGCTGTTTGGCGAGGAGAGCACTACGGGCTTTGAAAGGATTGGTGAAGCTTCAGGCATTGGTGAGAGGTCATATTGATAGGAAGCGAACGGCAGAGTGGTTGCATCGAGTACATGCAATTGTTCGAGTACAGGCACGTGTCCGTGCAGGGCGAGCACAAATTCTGCAGACACCATTTTCAAATTCTAAGTCATCTAAAGCAGACTACAATGGACCAGCAACACCAGACAAATTCGAAAGCCCGATCAGATCCAAGAGCATGAAATTTGATCATTCATCATCACTCAAGAGAAATGCGTCCAAGTCCCATCTTCAGATCCATGGTGGAAATCAAGATAAATGTTGGGATGACGATAAAAGCAATAGGATTCTCGAGATTGATTCTGGAAAACAACACTTTACTCCACCAAAACGCCGAAACCTCTTTCACTCCATTAACTATCCTTCAGTATGTGATAATCACAGCCAAAGTTTCTCTTCTACAAAGGACTCAAAAAGTCATCAATCAGGTCATAGCAAGTCTTCATATGAAGAAGGCGTTGTCGATAGTCCTCAACTCTTTTCTGTCTCCTCAAGGGACAATGGCCTCAAAAATAGTAGTAGTCCTTTTGCACCTAGCAGAAGCGATGACTCGAGAAGCTATCTGAGTTCTTATTCTGACTACCCAAGCTACATGGCTTACACTGAATCTTCAAAGGCAAAGGTCAGATCAATGAGTGCTCCAAAGCAAAGGCCTCATCAATATGAGAGGTCTAGTTCATCTAATAATAGGTATTCAGTTCAAGGATTGGCAACGCAGAAAGAAAATGCATTGCACACAAACTTCACTAGCAAAGCCTATCCAGGTTCTGGTCGTTTGGACAAGTTTGGTATGCCAGTGGGATATAGATACTGA 1521 0.4694 MFSASISCKAKFHCTELSLAQTHSLQPVLFSFPLLHLRPLSLSNASSFFKFQVKIFSLSSKSIVQSETMGKASKWFRSVFGLKKSESPSSPAPSPSTLHPGLASKPLKDKRRWSFVKSYRESGTSKSSDVRHTAFREEAVPSSGHIDGVYPDKHIMTVAAAKAAVAEAAVAAAQAATAAAFRLTSSGWCPGSFGTREEWAAIKIQAAFRGCLARRALRALKGLVKLQALVRGHIDRKRTAEWLHRVHAIVRVQARVRAGRAQILQTPFSNSKSSKADYNGPATPDKFESPIRSKSMKFDHSSSLKRNASKSHLQIHGGNQDKCWDDDKSNRILEIDSGKQHFTPPKRRNLFHSINYPSVCDNHSQSFSSTKDSKSHQSGHSKSSYEEGVVDSPQLFSVSSRDNGLKNSSSPFAPSRSDDSRSYLSSYSDYPSYMAYTESSKAKVRSMSAPKQRPHQYERSSSSNNRYSVQGLATQKENALHTNFTSKAYPGSGRLDKFGMPVGYRY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0440 506 Gene3D - 198 239 - -
Lele54g0440 506 Pfam Protein of unknown function (DUF4005) 406 474 IPR025064 -
Lele54g0440 506 SMART iq_5 196 218 IPR000048 GO:0005515
Lele54g0440 506 SMART iq_5 219 240 IPR000048 GO:0005515
Lele54g0440 506 MobiDBLite consensus disorder prediction 382 423 - -
Lele54g0440 506 MobiDBLite consensus disorder prediction 290 306 - -
Lele54g0440 506 MobiDBLite consensus disorder prediction 439 465 - -
Lele54g0440 506 MobiDBLite consensus disorder prediction 86 105 - -
Lele54g0440 506 MobiDBLite consensus disorder prediction 363 423 - -
Lele54g0440 506 ProSiteProfiles IQ motif profile. 197 225 IPR000048 GO:0005515
Lele54g0440 506 PANTHER IQ-DOMAIN 5-RELATED 69 467 - -
Lele54g0440 506 Pfam IQ calmodulin-binding motif 199 218 IPR000048 GO:0005515
Lele54g0440 506 Pfam IQ calmodulin-binding motif 224 238 IPR000048 GO:0005515
Lele54g0440 506 ProSiteProfiles IQ motif profile. 221 248 IPR000048 GO:0005515
Lele54g0440 506 MobiDBLite consensus disorder prediction 270 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0440 Lele-ChrLele54 4624874 4629751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0440 198 506 IQD Protein Family AT4G23060 45.946 3.37e-65 217