Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0426 ATGGCATCGTATAGGAAGCATGAGATTGAGAAGGATCAAGACGACGATGCTGGAGCTTCGGAGCTCAGCAACATGGCCAGTGAGCAAGAACAAGACCCTGCTACCACCAGCAGTACGACGGCGTTTCAAGTGTTGCCGTTGAAGGATGAGCCAAATGATTCGGCGCACTCGGACCGGAAGGGTGAGGCGGCTCGAGTTGGGGCTGGTCAGGTGGCGATAACTATGCAGGTGCCAATGCACTTGCCGGCGACGACAACTCGACGGTCATCGACGAAGGACCGCCACACCAAGGTGGAAGGTCGGGGACGGAGAATCCGAATACCAGCCACGTGTGCGGCTAGGATCTTTCAGCTGACTAGGGAGTTAGGCCACAAGTCCGACGGCGAAACCGTGCGGTGGCTTCTCGAGCACGCCGAGCAGGCCATCATCGAGGCCACTGGCACTGGCACCGTCCCGGCCATCGCCGTCTCTGTCGGCGGAACTCTTAAAATTCCCACGGCGTCTAACAATTCCAATGCCGAAACCACCAAGAAGCGGAGACGACCATCAAATAGCGATTTCGTGGATATAGACGACGCTGTTTCGCAGTCTTACGGGTTGGCCCCGATTCAATCCACGGTTCCTCAAGGTCAAGTGCCGGTGTGGGCAGTGGGAAACACAGGTATGGTGGTTCCAGCGAATGCCTTCTGGATGATCCCTCCGGCGGCGGCGACTCCGTTGTCAACTGGAGTAACTGGGTCGTCCAATCAACAACCTCAGATATGGGCTTTCTCTCCAACGGTAACCCCTGTATTCAACATGTCGGTGAGACCCATGGAACCAACGATAAGTATCCCAACCGGCGTAGAAGTTTCAGGCAGCAGGTCTAACTCAGGGGTAACTACTAGCACGGCGGGGCCGAAGGGGGCGAAGAGTTCAAGCATGGCACCGAGCGTGAGCTCAAGTGAGAGTGTTAGCCGCAGCAAGTTTCAGATGTTGAGAGATTTTTCTTTGGGGATTTATGATAAGCAAGAGTTGCAGTTGATGGGGCGGCGATCAGAGGATCAATGA 1050 0.5552 MASYRKHEIEKDQDDDAGASELSNMASEQEQDPATTSSTTAFQVLPLKDEPNDSAHSDRKGEAARVGAGQVAITMQVPMHLPATTTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTASNNSNAETTKKRRRPSNSDFVDIDDAVSQSYGLAPIQSTVPQGQVPVWAVGNTGMVVPANAFWMIPPAAATPLSTGVTGSSNQQPQIWAFSPTVTPVFNMSVRPMEPTISIPTGVEVSGSRSNSGVTTSTAGPKGAKSSSMAPSVSSSESVSRSKFQMLRDFSLGIYDKQELQLMGRRSEDQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0426 349 MobiDBLite consensus disorder prediction 280 321 - -
Lele54g0426 349 MobiDBLite consensus disorder prediction 20 45 - -
Lele54g0426 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 338 IPR005333 GO:0003700
Lele54g0426 349 MobiDBLite consensus disorder prediction 1 18 - -
Lele54g0426 349 Pfam TCP family transcription factor 90 165 IPR017887 -
Lele54g0426 349 MobiDBLite consensus disorder prediction 165 187 - -
Lele54g0426 349 MobiDBLite consensus disorder prediction 1 100 - -
Lele54g0426 349 ProSiteProfiles TCP domain profile. 91 145 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0426 Lele-ChrLele54 4183494 4184543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0426 87 342 TCP Transcription Factor Family AT2G45680 48.252 4.33e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele54g0426 TCP 3.9e-28 No_clan