Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele54g0425 | ATGGAGCTGGCATCGCTACCGAGGTTGTCACCGGTCGACAATGGTGAAATGGAGATCGGTAGTGGGAGAAAGAGTAAGGGGCCTAGTCCGTCAGCTGAGACTCAAAACAAGAAAGGATTGAGATTGCTTGTTCTTCTATATCCAATTAAGTTTTCACCAAACCTAATTTTGGACCGCGAAAGAGCTGTTGTTAATTACCTGGAAAACTTGGCCAAAAAAATTGAAAGGCATATGTCAAATACAATCGTTACTAGTGATTCATACGTGACAGTATCTCTGGCTGGTGCTGTAATTGCAAGAACATTTGTGATCGATAACGATGAGAACCCTAACTGGATGCAGCATTTCAAAGTTCCTGTGGCTCATTATGCGTCAGAAGTACATTTTGTGGTAAAAGATAGTGATATTGTGGGCTCACAAGTCATGGGTGTGGTTGGAATTCCAGTGGAACAGGTATACAATGGCACAAAAGTTGAAGGATCCTTTCCAATCCATAATTCTAGTGGAAAACCTTGTGAAAATGGAGCTGTCTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCACTTTATGGTCATGGAATAAGGGCAGGTCCTAGTTATAAAGGGGTTCCAGGTTCCCTTCCTCCACATAATTTGAAGATGGAAGGTGGTGTGAGTTATGAGCATGGCAATTGTTGGCGCGACATCTTTGAGGCGATAAGTCAGGCCCGGCGATTAGTATACATTGTAGGGTGGTCTGTGTACTACAATGTTAGACTAGTTTGA | 774 | 0.4238 | MELASLPRLSPVDNGEMEIGSGRKSKGPSPSAETQNKKGLRLLVLLYPIKFSPNLILDRERAVVNYLENLAKKIERHMSNTIVTSDSYVTVSLAGAVIARTFVIDNDENPNWMQHFKVPVAHYASEVHFVVKDSDIVGSQVMGVVGIPVEQVYNGTKVEGSFPIHNSSGKPCENGAVLSLSIQYIPFDKVALYGHGIRAGPSYKGVPGSLPPHNLKMEGGVSYEHGNCWRDIFEAISQARRLVYIVGWSVYYNVRLV | 257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele54g0425 | 257 | Pfam | C2 domain | 82 | 164 | IPR000008 | - | |
| Lele54g0425 | 257 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Lele54g0425 | 257 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 81 | 187 | IPR035892 | - | |
| Lele54g0425 | 257 | CDD | C2_plant_PLD | 42 | 185 | - | - | |
| Lele54g0425 | 257 | SMART | C2_3c | 59 | 161 | IPR000008 | - | |
| Lele54g0425 | 257 | ProSiteProfiles | C2 domain profile. | 37 | 162 | IPR000008 | - | |
| Lele54g0425 | 257 | PANTHER | PHOSPHOLIPASE D | 73 | 257 | IPR015679 | - | |
| Lele54g0425 | 257 | Gene3D | C2 domain | 62 | 191 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele54g0425 | Lele-ChrLele54 | 4170664 | 4173363 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele54g0425 | 4 | 257 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 46.975 | 7.95e-78 | 253 |