Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0410 ATGATCTATAGCTTGGAACATTATCTTTCTTGGTTTCTGATTGCGATGGTATTGAATATTGATGATGATGTATTAATGGTGATGGTAGATTGGTTGGTAGAGAAGATCAGAAGAATGAATGCATTGCAGACAGAGAAACAAACAGATTGGATTTCCAACGTTAAAGCTTATCATTGCCAGAGAAAGAACCAAGTCTCTCATGCACGTGCTTCAGCTTCAGTTGCTTCAAGCTTTGTAACTGAGGAAAGATTTCAACTTTGGACCATGAAAGGGGTCAGTCAAATTCGCCTCTTTCTTCATCATGTTCTTATGTTTGCTGCTCTTTTCTCATCACTTTCCTCTTTCACAGTCTCCTCATTTCCAGAATCTGAAATGGAAATTCTGCATCAATTTAAGGGAAATGTCACTGATGACCCTTACAACAGCCTGAGTTCATGGGTATTTAGTGGAAATCTATGTGAAGATTACATGGGTGTTTCTTGTACTTCAGAAGGATTTGTAGAAAAAATTGTTCTTTGGAACACTAGCTTAGCTGGAACTTTGTCTCCAGCACTTTCCCAGTTAAAATTGTTGAAGGTTTTGACATTGTACGGGAATCGGTTTTCTGGTAAAATCCCAGAAGAATATGCTGAGTTTCAATCAATATGGAAGATCAATTTAAGCTCTAATGCATTATCTGGCCAAATTCCAGAATTCATAGGTAATATACAGAGCATTCATTTTCTTGATTTGTCATTCAATGGCTTCTCTGGAGAAATACCATCATCTTTTTTCAAATCCTGCAACAAAACCAAGTTCCTTTCTCTTTCTCATAACAATCTCTCAGGTTCAGTTCCATCTTCCATTATGAATTGCTTTAACCTTGAAGGTTTTGATTTTTCTTTCAACAATCTCACTGGGAATATTCCTTCAACACTTTGTGAAATTCCTAGGTTGTCCTTTGTGTCACTGAGGAATAATGCCGTATCAGGAACAGAGCAAGATCAGATTTTCTCAGAATGTCAGAGTTTGGTATATTTAAATCTTGCTATTAACATATTCAGTGGTTCTGCACCATTCAACATGCTTGAAATGAATAATCTTACTTATTTCAATATATCATATAATGGATTCAGTGGGAATATTCCTGAGATGAGTGCATGTAGTGAGAGATTAGAATTTTTGGATGCTTCAGGGAATAATTTGGATGGGGAGATTCCAAAAAGCATAACAAGATGCAAGAATCTCAAGCTTTTGGCTTTGGAGGTAAATAGGCTTATAGGGACAATCCCACTAGGGATTCAAGAATTGAAGAGTTTGTTGGTTGTTAAACTGGGTGATAATTCAATTGGTGGAATCATTCCCAAGGGTTTTGGTAACGTTGAACTTCTTGAGATTCTGGATTTGCACAATCTAAACCTCACTGGTGAAATTCCAAATGATGTAAGCAATTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTAGAAGGAGATATTCCTCAGACCCTTTACAACATGACAAACATGGAGGTTCTTGACCTACATCAAAACAAGCTCAACGGAAGCATCCCACTAAGCCTAGGAAATTCATCAAGCATTAGATACTTAGATTTGTCACATAATCTGCTTTCTGGTTCAATCCCTTCTTCACTTGGAAATTTAAAATACTTAATGTATTTTAATCTGTCATTCAACAATCTCTCTGGTGTCATTCCTCCTATTGAAACCATACAGGGTTTTGGTTCATCTGCATTTTCCAACAATCCTTTTCTATGTGGTTCTCCTTTAGATGATACCTCTTGCACAGAAAATGGCACAACTTCAGCTTCTGGAAAGACTAAAGTGCTTAGTGTTTCTGCAATTGTTGCCATTGTTGCTGCAGTTTTCATTCTTGCTGGGGTTTGTTTGGTGGCATTCTTGAATACTAAGGCTCATAACAGAAAGAAGGATGATCAGACAATGATTGTTGATGAGGGCACACCTCTTGGATCATCAATAGAAGAATCATCAAGTGTTGTAATAGGGAAGCTGGTTCTCTTCAACAAGAGCTTACCATCAAAATATGAAGATTGGGAAGCAGGAACAAAAGCATTGCTCAACAAAGAGTCCTTGATCGGCGCCGGATCAATCGGTACAGTTTACAGAAAAAATTTTGAAGGTGGGGTATCAGTTGCAGTTAAAAGGCTTGAAATTTTGGGAAGAATTAGAAGCCAGAATGAATTTGAACATGAAATAGTTCAACTTGGCAACCTCAAACACCCAAATTTAGTTTCTCTCCAAGGTTACTATTGGTCCCCAACAATGCAAATGATCCTATCAGAGTTTGTCCCAAATGGAAATCTCTTTGATAATCTACACACAACTAGCCACGTCAGCAATGAACAACAACTAAATTGGTCCAGAAGGTTACAGATTGCACTTGGAACAGTGAAAGCCCTCGCGTATCTTCACCATGATTGTCAACCTCCAATTCTGCATCTGAACCTCAAATCCTGCAACATACTCTTAGACAACAAGTATGAAGCTAAGCTATCAGATTATGGTCTAAACAAGTTACTTCCTATTAATAACAATTATGGTGGTGGTGGAACCAAATTCCACAATGCAGTGGGGTACATTGCACCAGAGTTTGCTACGAGTTTAAGGCAGAGTGAGAAATGCGATGTTTATAGTTTTGGAGTAATTCTGTTGGAACTGGTCACAGGGAAGAAGCCTGTAGAAAGTGTAGCAGCAAATGGAGCGGAGGTGGTGTTGTGTGAGTATGTGAGAGTGTTGTTGGAGAGTGGATCTGCTTCAGATTGCTTGGATAGAAGATTGATAGGTTTGGCTGAGAGTGAATTCATTCAGGTTATGAGAATGGGACTAATTTGTACTTCACAAGATCCTTCTAGGAGACCAAGCATGGCTGAGATTGTTCAGTTTCTTGAGTCTATTGAAATTGCATCAGAATCACGTTGA 2946 0.3819 MIYSLEHYLSWFLIAMVLNIDDDVLMVMVDWLVEKIRRMNALQTEKQTDWISNVKAYHCQRKNQVSHARASASVASSFVTEERFQLWTMKGVSQIRLFLHHVLMFAALFSSLSSFTVSSFPESEMEILHQFKGNVTDDPYNSLSSWVFSGNLCEDYMGVSCTSEGFVEKIVLWNTSLAGTLSPALSQLKLLKVLTLYGNRFSGKIPEEYAEFQSIWKINLSSNALSGQIPEFIGNIQSIHFLDLSFNGFSGEIPSSFFKSCNKTKFLSLSHNNLSGSVPSSIMNCFNLEGFDFSFNNLTGNIPSTLCEIPRLSFVSLRNNAVSGTEQDQIFSECQSLVYLNLAINIFSGSAPFNMLEMNNLTYFNISYNGFSGNIPEMSACSERLEFLDASGNNLDGEIPKSITRCKNLKLLALEVNRLIGTIPLGIQELKSLLVVKLGDNSIGGIIPKGFGNVELLEILDLHNLNLTGEIPNDVSNCRFLLELNVSGNNLEGDIPQTLYNMTNMEVLDLHQNKLNGSIPLSLGNSSSIRYLDLSHNLLSGSIPSSLGNLKYLMYFNLSFNNLSGVIPPIETIQGFGSSAFSNNPFLCGSPLDDTSCTENGTTSASGKTKVLSVSAIVAIVAAVFILAGVCLVAFLNTKAHNRKKDDQTMIVDEGTPLGSSIEESSSVVIGKLVLFNKSLPSKYEDWEAGTKALLNKESLIGAGSIGTVYRKNFEGGVSVAVKRLEILGRIRSQNEFEHEIVQLGNLKHPNLVSLQGYYWSPTMQMILSEFVPNGNLFDNLHTTSHVSNEQQLNWSRRLQIALGTVKALAYLHHDCQPPILHLNLKSCNILLDNKYEAKLSDYGLNKLLPINNNYGGGGTKFHNAVGYIAPEFATSLRQSEKCDVYSFGVILLELVTGKKPVESVAANGAEVVLCEYVRVLLESGSASDCLDRRLIGLAESEFIQVMRMGLICTSQDPSRRPSMAEIVQFLESIEIASESR 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0410 981 PANTHER OS05G0588300 PROTEIN 397 498 - -
Lele54g0410 981 Gene3D Phosphorylase Kinase; domain 1 663 771 - -
Lele54g0410 981 Gene3D Ribonuclease Inhibitor 121 261 IPR032675 -
Lele54g0410 981 SUPERFAMILY Protein kinase-like (PK-like) 696 973 IPR011009 -
Lele54g0410 981 FunFam Putative LRR receptor-like serine/threonine-protein kinase 672 771 - -
Lele54g0410 981 Gene3D Ribonuclease Inhibitor 262 327 IPR032675 -
Lele54g0410 981 Gene3D Ribonuclease Inhibitor 328 605 IPR032675 -
Lele54g0410 981 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 260 600 - -
Lele54g0410 981 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 121 259 - -
Lele54g0410 981 Pfam Protein kinase domain 697 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0410 981 CDD STKc_IRAK 701 974 - -
Lele54g0410 981 Gene3D Transferase(Phosphotransferase) domain 1 772 981 - -
Lele54g0410 981 FunFam Putative LRR receptor-like serine/threonine-protein kinase 773 978 - -
Lele54g0410 981 ProSiteProfiles Protein kinase domain profile. 695 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0410 981 Pfam Leucine rich repeat 483 539 IPR001611 GO:0005515
Lele54g0410 981 SUPERFAMILY L domain-like 261 593 - -
Lele54g0410 981 SUPERFAMILY Outer arm dynein light chain 1 168 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0410 Lele-ChrLele54 3937575 3941134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0410 102 980 Receptor kinase-like Gene Family AT1G62950 60.246 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele54g0410 Pkinase 9.9e-37 CL0016