Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0403 ATGATATGCTCCGTCGAACTACCATGTTCTTCCACCGGGGGATCAACGGCACCGGCGTCTCAAGGGAGTGTTCCGCCACCTCAACCAGTTACTATGGGAGTCGCTCCGGCTGCGACAACGATGCCGGTGAAGAAGAAGAGGGGTCGGCCGAGGAAGTACGGACCAGATGGCTCAGTGACGACGATGGCTCTATCTCCGTCGCCGATATCTTCTTCAGCTCCGCCGGCAGTAATCGATTTCTCGGCGGGGAAACGCGGTAAAGTGCGCCCTGCTAACTCAGTACACAAAGCCAAATTCGAAGTTGAAAATTTAGGTGAATGGGTTGCAGGCACTGTTGGTACTAATTTTACACCTCATATTATTACCATTAATTCTGGAGAGGACATCACTATGAAGATAATATCATTTTCTCTGCAGGGACCGCGAGCTATATGCATTCTTTCTGCAAGTGGAGTCATATCAAGTGTCACGCTTCGGCAGGCTGATTCTTCTGGGGGTACATTGACGTATGAGGGACGGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCGAATGAAAGTGCAGGAACACGAAGCAGATCGGGTGGTATGAGCGTTTCTTTAGTGAGTCCAGGTGGACGTGTCATAGGGGGTAGTGTAGCCGGTTTGTTGGTAGCAGCAAGTCCTGTGCAGGTTGTGGTTGGCAGTTTTCTGGCAGGAGACCAGAATGATCTAAAGGCAAAGAAACAGAAACATGAGATTAATGTATCAACAGCAATTGTTCCTTTGTCTACTGCTGATCCATTACCTATCCTCTCATCATCTCCACCTTCCTTCCCTCCTCACAATTGGTCTGTATCGCCTTCTGAGACAAGGAACAACATGAACACTGACATTAATGTGCCTCTACCTGCAGGAATTTCTGAGTTAGCTAATGATATAAATGTGTTTCTCTACTTTGGTTTGCTAAAGTTGTTTGGGGTAGAATGTTCTGATTTGTATGTTATTTCTTCCTCCGATCACCTTTCTTCTTGA 1017 0.468 MICSVELPCSSTGGSTAPASQGSVPPPQPVTMGVAPAATTMPVKKKRGRPRKYGPDGSVTTMALSPSPISSSAPPAVIDFSAGKRGKVRPANSVHKAKFEVENLGEWVAGTVGTNFTPHIITINSGEDITMKIISFSLQGPRAICILSASGVISSVTLRQADSSGGTLTYEGRFEILSLSGSFMPNESAGTRSRSGGMSVSLVSPGGRVIGGSVAGLLVAASPVQVVVGSFLAGDQNDLKAKKQKHEINVSTAIVPLSTADPLPILSSSPPSFPPHNWSVSPSETRNNMNTDINVPLPAGISELANDINVFLYFGLLKLFGVECSDLYVISSSDHLSS 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0403 338 CDD DUF296 117 231 IPR005175 -
Lele54g0403 338 Gene3D - 118 253 - -
Lele54g0403 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 233 - -
Lele54g0403 338 MobiDBLite consensus disorder prediction 1 70 - -
Lele54g0403 338 ProSiteProfiles PPC domain profile profile. 113 256 IPR005175 -
Lele54g0403 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 231 IPR005175 -
Lele54g0403 338 FunFam AT-hook motif nuclear-localized protein 1-like 118 249 - -
Lele54g0403 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 21 284 IPR039605 GO:0003680
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele54g0403 Lele-ChrLele54 3788305 3793249 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0403 43 295 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 66.296 3.39e-108 318