Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0395 ATGAATTCAGTTAATTTCCTGGTTTCTTCTCTGTTACTTCTCTTGCTTGTGTTTCCTAATCTGCAAACCGTTCGAGGAAATGCGGAGCTGAGGGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGACAAGGTTCTTGGTTCTTGGACCAGTGATGGTGAGCCATGTAGTGGTTTGTTTGAAGGGATAGCATGCAACGAGCACAGGAAAGTGGCCAACATTTCGTTACAGGGAAAGGAGCTCTCAGGATGGCTCTCTCCATCAGTGGCTGAACTCAAATGTTTATCTGGTTTATACTTGCACTACAACAATCTTTCTGGGGAGATCCCCAGAGAGATTTCAAATCTCACTGATTTGGTTGATCTCTATCTTGACTTTAATAATCTAACTGGAAACATACCTCCTGAGCTTGGCAACATGCCTGATCTCCAAGTGTTGCAGTTAGGATATAACCAGCTTGTGGGAACTATACCAAAAGAGATGGGCTCCTTGAAGCAGCTTACTGCCTTAGAATTGCAATATAACAAATTAACTGGCACAATTCCTCTCAGCTTGGGGAATTTGGAGAAGCTAAGGATGCTAAATCTGAGCTTTAACAGCTTCAATGGTTCAATCCCTGCCACACTTGCTGGTCTTGCAAAGTTGCAAGTGCTTGATATTCGAAACAATTCTCTATCAGGAAGAGTTCCTTCTTCTTTGAAGACATTGAGGGATGGATTCCAAGCTGAAAATAACCTGTATTTATGTGGACATGGGTTTTCTACTTTTAAAGCTTGCATCAATGATCCAAATTTAAAACCTAGCCAGATTGACACCTCAAATCCAACCACAAAAGAAGGTATTCCTCACGCAAAGGATTTTCCGGAACCCGAAAATTTTCAGCTGCATTGTAACCATACCCATTGCTCAAAATCAAGAATGTTTCAAGCACTCATTGCAGCAAGTGTTATAACCATCATAATCACATTCATATGTGCTGGACTTTTCACTTTTCTTAGATACCGCCGCCAAAAGCAAAGAATCACAAATTCATCAGAATCTTCTGAAGGGAAACTCAGTCCTGATCCGCCTAAAGAAATGTACAAAAGAAGTCCATCGCCACTCTTTAATCTTAACTACTATAATGGATGGGATCCTAATGCAATGGCTGATTCTCAAAATGGAAACAGATTATCCCATGAGTATCTAAACCGTTATAGGTTTAATGTGGATGAGATTGAATCTGCTACACAGTACTTCTCTGAGGCTAACTTATTAAGTAAGAACAAATTATCAGCAGTTTACAAGGGAGTTCTCAGAGATGGCTCACTTGTGGCTATAAGAAGCATTAATGTGACATGTTGCAAGACTGAGGAAGATGACTTTGTAAATGGGTTGAACTTAGTACTATCTTTGAGACATGGAAACCTAATTAGGCTCAGAGGTTTCTGTTGCTCTGCAAGTAGAGGCGAATGTTTCCTTGTGTATGACTTTGCCCCTAAGGGTGACCTGTCTCAGTACCTTGACATGGAAGATGGAAGTGGTCAAGTTCTTGATTGGTCCAAGAGGGTTTCTATCATCCAGGGCATCGCAAAAGGTATTGGATATCTACACAGCAATGAAACAAACAAGCCAACAATGGTACACCAAAACATTTCAGTTGAAAAAGTTGTGCTTGACCATCAATTCAACCCCTTGATTATGGATTCTGGCCTCCCAAAGCTTCTCGCAGACGATGCAGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACTTAGCTCCTGAATACATCACTACTGGCAGATTCACGGAGAAAAGTGACATTTATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCGGTTGAGTCTTTCAGGTTTGAAGAGTTTGTTGATTCAAATATGAAGGGAAGATATGTGAAATCTGAAGCAGCAATGCTGGCGAAGCTTGCAGTGATGTGTACTCATGAGCTTCCTGATGAGAGGCCAAGTATGGTGGAAGTGATTCATGAGCTCAATGCATTTCCTGCTCAACAACATTCTTCTTGA 2070 0.4121 MNSVNFLVSSLLLLLLVFPNLQTVRGNAELRALMELKSSLDPEDKVLGSWTSDGEPCSGLFEGIACNEHRKVANISLQGKELSGWLSPSVAELKCLSGLYLHYNNLSGEIPREISNLTDLVDLYLDFNNLTGNIPPELGNMPDLQVLQLGYNQLVGTIPKEMGSLKQLTALELQYNKLTGTIPLSLGNLEKLRMLNLSFNSFNGSIPATLAGLAKLQVLDIRNNSLSGRVPSSLKTLRDGFQAENNLYLCGHGFSTFKACINDPNLKPSQIDTSNPTTKEGIPHAKDFPEPENFQLHCNHTHCSKSRMFQALIAASVITIIITFICAGLFTFLRYRRQKQRITNSSESSEGKLSPDPPKEMYKRSPSPLFNLNYYNGWDPNAMADSQNGNRLSHEYLNRYRFNVDEIESATQYFSEANLLSKNKLSAVYKGVLRDGSLVAIRSINVTCCKTEEDDFVNGLNLVLSLRHGNLIRLRGFCCSASRGECFLVYDFAPKGDLSQYLDMEDGSGQVLDWSKRVSIIQGIAKGIGYLHSNETNKPTMVHQNISVEKVVLDHQFNPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRFEEFVDSNMKGRYVKSEAAMLAKLAVMCTHELPDERPSMVEVIHELNAFPAQQHSS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0395 689 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lele54g0395 689 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Lele54g0395 689 Gene3D Transferase(Phosphotransferase) domain 1 493 687 - -
Lele54g0395 689 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Lele54g0395 689 FunFam Protein NSP-INTERACTING KINASE 2 385 492 - -
Lele54g0395 689 ProSiteProfiles Protein kinase domain profile. 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0395 689 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 154 683 - -
Lele54g0395 689 FunFam Protein NSP-INTERACTING KINASE 2 26 174 - -
Lele54g0395 689 Gene3D Phosphorylase Kinase; domain 1 380 492 - -
Lele54g0395 689 FunFam Protein NSP-INTERACTING KINASE 2 493 683 - -
Lele54g0395 689 MobiDBLite consensus disorder prediction 341 365 - -
Lele54g0395 689 Pfam Protein tyrosine and serine/threonine kinase 421 679 IPR001245 GO:0004672|GO:0006468
Lele54g0395 689 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Lele54g0395 689 Gene3D Ribonuclease Inhibitor 141 261 IPR032675 -
Lele54g0395 689 SUPERFAMILY L domain-like 29 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0395 Lele-ChrLele54 3675377 3679540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0395 7 527 Miscellaneous Gene Families AT4G22730 56.506 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele54g0395 PK_Tyr_Ser-Thr 3.5e-32 CL0016