Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele54g0381 | ATGCATTTCTCAGACATGGCGAGACTTGGGATTTCTTTGTTACTACTGCTAAATCTCCTCATTTACACACCAGAATCCGCCATAGCCAGACCTTCAAACCCAACAGATTTCATAAAGTCCTCTTGCAGAGCCACTCGTTACCCTGTTCTCTGCGTTCAGTCCATTTCAAGATATGCAACCGTGATTCATCAAAGCCAGAGACAATTAGCCATCACTGCTCTCTCCGTCAGCATCTCAAGAACTAGATCATGTTCTTCCTTCGTCCACAACCTTGGCCGAGCAACAAGAATAAAAAACCCCAGAGAACACAGAGCTGTTCAAGACTGTATAGAGAACATGGAGGATAGCCTGGACCGGCTCCACCAATCAGTTCAGGAGCTGGGCCGAACCGGTCGGGCCGTTGATCAGGACTTTGAGTGGCATATGAGCAATGTTCAGACTTGGGTTAGTGCTGCTCTCACAGATCAAGACACATGTCTGGATGGGTTCTCTGGTTCTGGTTCAGATGAAAACCTCAAGGCTGCTATTAGAAACAGGGTTGTGAATGTTGCTCAAGTTACTAGTAATGCTCTTGCTTTGGTTAATTGCTTCGCTTCAAGGCATCGAAGTTAA | 612 | 0.4624 | MHFSDMARLGISLLLLLNLLIYTPESAIARPSNPTDFIKSSCRATRYPVLCVQSISRYATVIHQSQRQLAITALSVSISRTRSCSSFVHNLGRATRIKNPREHRAVQDCIENMEDSLDRLHQSVQELGRTGRAVDQDFEWHMSNVQTWVSAALTDQDTCLDGFSGSGSDENLKAAIRNRVVNVAQVTSNALALVNCFASRHRS | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele54g0381 | 203 | SMART | PMEI_2 | 33 | 193 | IPR006501 | GO:0004857 | |
| Lele54g0381 | 203 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 11 | 195 | IPR006501 | GO:0004857 | |
| Lele54g0381 | 203 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 14 | 193 | - | - | |
| Lele54g0381 | 203 | Coils | Coil | 202 | 203 | - | - | |
| Lele54g0381 | 203 | Pfam | Plant invertase/pectin methylesterase inhibitor | 36 | 193 | IPR006501 | GO:0004857 | |
| Lele54g0381 | 203 | CDD | PMEI-like_3 | 40 | 199 | - | - | |
| Lele54g0381 | 203 | FunFam | Pectin methylesterase inhibitor 1 | 33 | 197 | - | - | |
| Lele54g0381 | 203 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 34 | 197 | IPR035513 | - | |
| Lele54g0381 | 203 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 36 | 197 | IPR035513 | - | |
| Lele54g0381 | 203 | Coils | Coil | 110 | 130 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele54g0381 | Lele-ChrLele54 | 3440538 | 3441149 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele54g0381 | 38 | 194 | Carbohydrate Esterase | AT3G14310 | 31.210 | 4.78e-24 | 97.1 |