Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0377 ATGAATACATTTTCACATGTTCCTCCGGGGTTTCGATTCCATCCCACAGACGAAGAACTGGTTGATTACTACCTCAGAAAGAAGGTAGCTTCAAAAAGGATTGATCTTGATGTCATCAAAGACGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGAACTTTGCAGAATAGGAAGCGAGGAACAGAATGAATGGTACTTCTTCAGCCACAAAGATAAGAAGTATCCGACAGGGACTCGAACAAACAGAGCGACAAAAGCAGGATTCTGGAAGGCAACAGGAAGAGATAAAGCGATATATACAAGGCATTGTCTGATTGGAATGAGAAAGACTCTTGTGTTTTACGAAGGAAGAGCTCCTAATGGCCAGAAATCTGACTGGATCATGCATGAATATCGCCTTGAAACTAATGAAAACGCTACTCCTCAGGAAGAAGGGTGGGTTGTATGCAGAGTGTTCAAGAAGAGAATGACGACAGTGAGAAAAGTAGGAGAATATGAATCACCATGTTGGTACGACGAAGCAGCCTCGTTGATGCAAGAGCTTGATCAATCTCCAAGGCGTCATCATCATCATAATATTTCTGCCGCATCACCTTACTACGCATGCAAGCAAGAGTTTGAATTCCAATACAACTTCAATAATCTTCCCCACGATGCTTTCCTTCAACTTCCTCAGCTTGAAAGCCCCAATAAACTCCCCACCATCTTCAGCAACACCGCCGCCTTCGATCATCACCACAGAACCGCAGCCGCCGCCACTACCATGAACTCATCGACGGCGGCGCTTTATGATGATCAAGTTATCACTGATTGGAGGGTGTTTGATAAGTTTGTTGCTTCTCAGCTGAGTCAAGATCTCCATCATCAACAACAACAAGCTTCCAAGGAAACAACTTACGATAATAATTCCAATAATGCTGACGACGTTGTTGCCGGCACTGAACAAGTTACCATGTTGGACAATGCATCCGCATCCACCACCACCACCTGCGACATTGAACAATGGAAGTGA 1017 0.4415 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCRIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYTRHCLIGMRKTLVFYEGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTVRKVGEYESPCWYDEAASLMQELDQSPRRHHHHNISAASPYYACKQEFEFQYNFNNLPHDAFLQLPQLESPNKLPTIFSNTAAFDHHHRTAAAATTMNSSTAALYDDQVITDWRVFDKFVASQLSQDLHHQQQQASKETTYDNNSNNADDVVAGTEQVTMLDNASASTTTTCDIEQWK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0377 338 MobiDBLite consensus disorder prediction 290 309 - -
Lele54g0377 338 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Lele54g0377 338 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Lele54g0377 338 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Lele54g0377 338 FunFam NAC domain-containing protein 16 160 - -
Lele54g0377 338 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 291 - -
Lele54g0377 338 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0377 Lele-ChrLele54 3368240 3369925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0377 1 287 NAC Transcription Factor Family AT1G62700 60.661 1.24e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele54g0377 NAM 3.9e-38 No_clan