Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0373 ATGATCAAGCACGCCAAGAGCAAGAAGATTGCAATGTTCTTAGACTACGATGGCACTCTTTCACCCATAGTGGATGATCCAGATTGTGTTTTCATGTCTGAAGCTGTAAGCTTTTCTTCGAATTTGAAACTAATTAATGATTTAGTTAAACTAACAGAACTGTACTATGCTGGTAGTCATGGCATGGACATTATTGGGTATGTTTGTCCCTCTCTGTCCAATAGCCATCCACAGCACTGTGTTAAGTCCACTCCCCAACAGGGAAAGGAGATCACTCTGTTTCAACCTGCTAGAGAATTCCTGCCGATGATTGATGAGGTATTCAAAAGGCTGGTGGAGATGACTAAAGATATAAAAGGAGCAAAAGTTGAGAACCACAAGTTTTGTGTTTCTGTACATTATCCTAATGTAGAAGAAAACGTAAGTGTCTGTCATGAAATTCTTGGAAATATTGGTGAACTGGACGAGGAAAGAAGAAAACAAGTCGCTCGGTTTTATTTTTCTAAAATATCATAA 516 0.3876 MIKHAKSKKIAMFLDYDGTLSPIVDDPDCVFMSEAVSFSSNLKLINDLVKLTELYYAGSHGMDIIGYVCPSLSNSHPQHCVKSTPQQGKEITLFQPAREFLPMIDEVFKRLVEMTKDIKGAKVENHKFCVSVHYPNVEENVSVCHEILGNIGELDEERRKQVARFYFSKIS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0373 171 Gene3D - 12 96 IPR023214 -
Lele54g0373 171 SUPERFAMILY HAD-like 11 141 IPR036412 -
Lele54g0373 171 Pfam Trehalose-phosphatase 36 146 IPR003337 GO:0003824|GO:0005992
Lele54g0373 171 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 140 IPR044651 GO:0004805|GO:0005992
Lele54g0373 171 Gene3D - 97 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0373 Lele-ChrLele54 3320224 3322739 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0373 54 3320224 3322739 Lele55g1122 55 17577704 17581371 hybridization
Lele54g0373 54 3320224 3322739 Lele56g1069 56 14041567 14041883 hybridization