Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0341 ATGTCAGTGTGTCTCCTTCTTCATCTTCTACTGTATGCAAACTATACTAACCTTAATGGCTTCTCTTTCGACTCTCTTGTTCTTCATCTCGCTGCAACTGCTCTTGGCTTACACTTGCTTATTGCATGCACTATCTGCAACCCCCATGGGTCATCATATCGTGTGATTATCACCGTCGACGTCAACGGAGGTGGGCGTTTCCGGTCGATCCAAGCTGCCGTGGATGCTGTGCCAGACAACAATAGAATGAATGTGGTTATTCAAATCAGCTCCGGATACTACATAGAGAAAGTGGTGGTGCAGGTGACGAAGCCGTATATTACGTTTCAGGGAGAGGGGAGAGATAAGCCGGTGATAGAATGGCATGATCGAGCCGCTGATCTTGGCCCCAATGGACAACAATTACGAACTTACAAACAGCTTCTGTCACAGTTTTTGCCAACTTTTTCTCTGCTAAGAACATCAGCTTCAAGGGTGGCAAACGGTGTCGTTTAG 495 0.4667 MSVCLLLHLLLYANYTNLNGFSFDSLVLHLAATALGLHLLIACTICNPHGSSYRVIITVDVNGGGRFRSIQAAVDAVPDNNRMNVVIQISSGYYIEKVVVQVTKPYITFQGEGRDKPVIEWHDRAADLGPNGQQLRTYKQLLSQFLPTFSLLRTSASRVANGVV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0341 164 Pfam Pectinesterase 57 121 IPR000070 GO:0030599|GO:0042545
Lele54g0341 164 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 134 - -
Lele54g0341 164 Gene3D - 51 157 IPR012334 -
Lele54g0341 164 SUPERFAMILY Pectin lyase-like 53 125 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0341 Lele-ChrLele54 2959374 2960439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0341 50 139 Carbohydrate Esterase AT5G47500 61.111 2.29e-34 122