Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0339 ATGGACGAAGTCCACGAAGGACTACCAAATAGAGAACTTTATGCACTCTTAAACTTGTCGCCGGATGCCTCCGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCGCAAGCCTATCACCCTGATAAATACCAAGCTCCCCATATGAAAGACATTGCTACTGCAAACTTTCAACGTATTTGTGAAGCGTATGAAGTTTTGTCAGATCCAAATAAGAGGCAAATATATGACATATATGGCATGGAAGGTTTGACCTCTGGTCTGGAACTTGGTTCGAAGCTGGATAAAGCTGAAGAGATAAAGGCTGAATTGGAGAGGCTACGGCGATTGAAGGAGATGCAAAAGATTTCAGCACATTTTAGAACTTCTGGTACAATTCTGGCCAATATGTCTTTGCCACACTGGCGAAATGGTGATGGCCTCATGAGAGGAATGTCTATGACCAGCGAAGCTCAGTCTCAGTTATCAAAACATAATAGTGTTGCAATTGGTGGCAATTTAGCAGTTAATGACAATGCAGGTGGTGGGGTTGCTACTGCCTTGTTTAGGCATGAGATTTCAGAAGCTTCTTCCATAGAATTTATGGCTTCAGCTGGGTTGCGAGCACTGATAGGGGTGCAAACAACACGTCAATTATCAGCACATTCAGCTGCTACGTCAGGCCTTGCTATGTCTTTGCAAGATGGTTCATTGAATCTTTCTAATTCATGGAACCGCCAACTGTCAGAAACAGCAAGTGGACATATACAACTTGCTTTGGGGCCACAGTCATCTATAGCTGTAGGGTGGCAAAAGAAAGATGAGAGAAGATCTGCCTCAGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTTGCAGCTCATTATACTCATCACTTGTCTTCTAAATCTCATGGCCGCATCGCGGGTAGAATTGGGAGTTCAACCCTTGAGATTGAAATCGGGGGTGGGAGGAAGATATCCAAATTCAGCACTGTGCGCTGGTTGTATACAATAGGAATTCAGGGCATCATTTGGAGATTTGAACTGCATCGTGGTGGCCAAAAGTTAATTATCCCTATTTTGCTGACCAGACATTTGAACCCTGTCTTTGCTAGTGGGGCACTGATTATTCCAGCATCTCTATACTTCCTTTTGAAGAAATTTTTAATCAAACCGTATTACCTTACAAGGAATAAGCAGAAGGCTCTAGAGAATGCAGAGAAAACTTCTTCTCAGGTCCAAGAAGCAAGGGCCGCGGCTGAGAAAGCTCAGCAGTTACAACAAACTGTCGCTAATAGGAAAAAGAATAAGCAATTAGAAACAGGCGGACTAGTTATTACGAGAGCACTATATGGAAATCAGGTTATTTTGAACAAGATAAATGCATCAAGTGCATCAAGTCGTGAATCAGCTTCAGATATCATAGATGTTGCAATACCTCTGAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCGGGCATCATGGGCTTTTGCGATCCATGTCCAGGAGAACCGAAAAAGTTGTATGTAGAGTACTCTTACGCAAGCAACCAATGCAAGGTCTTGGTTGATGATTGTGAAGAGTTATTGATACCCCGGGGAGTTCAGAGGATTTGA 1623 0.4276 MDEVHEGLPNRELYALLNLSPDASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATANFQRICEAYEVLSDPNKRQIYDIYGMEGLTSGLELGSKLDKAEEIKAELERLRRLKEMQKISAHFRTSGTILANMSLPHWRNGDGLMRGMSMTSEAQSQLSKHNSVAIGGNLAVNDNAGGGVATALFRHEISEASSIEFMASAGLRALIGVQTTRQLSAHSAATSGLAMSLQDGSLNLSNSWNRQLSETASGHIQLALGPQSSIAVGWQKKDERRSASGEVKFGTSSFDVAAHYTHHLSSKSHGRIAGRIGSSTLEIEIGGGRKISKFSTVRWLYTIGIQGIIWRFELHRGGQKLIIPILLTRHLNPVFASGALIIPASLYFLLKKFLIKPYYLTRNKQKALENAEKTSSQVQEARAAAEKAQQLQQTVANRKKNKQLETGGLVITRALYGNQVILNKINASSASSRESASDIIDVAIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKKLYVEYSYASNQCKVLVDDCEELLIPRGVQRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0339 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Lele54g0339 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Lele54g0339 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele54g0339 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele54g0339 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Lele54g0339 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Lele54g0339 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 540 IPR042162 -
Lele54g0339 540 Pfam DnaJ domain 13 77 IPR001623 -
Lele54g0339 540 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Lele54g0339 540 Coils Coil 393 430 - -
Lele54g0339 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Lele54g0339 540 SMART dnaj_3 11 72 IPR001623 -
Lele54g0339 540 Gene3D DnaJ domain 5 101 IPR036869 -
Lele54g0339 540 Coils Coil 90 117 - -
Lele54g0339 540 CDD DnaJ 12 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0339 Lele-ChrLele54 2927665 2938290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0339 14 77 C2H2 Transcription Factor Family AT1G74250 46.970 1.49e-08 55.5