Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0325 ATGACACGGCGGTGCTCCCATTGCAGCCATAATGGTCACAACTCCAGGACCTGTCCCAACCGTGGAGTGAAGCTATTCGGAGTCCGATTGACTGATGGGTCGATCCGGAAGAGTGCTAGTATGGGCAATCTTAGCCACTATGCCGGTTCGAGTTCCGGGCCCCATCAGACCGGATGTAACACTCCGGGTTCTCCCGGCGAGACACCTGATCACGGTGCGGTCGCAGACGGTTACGCCTCCGAGGATTTTGTACCTGGGTCGTCTTCAAGTTCACGTGAAAGGAAAAAGGGTGTTCCATGGACTGAGGAGGAACATAGAATGTTTCTACTTGGATTGCAGAAACGAGGCAAAGGTGATTGGCGTGGAATTGCACGAAATTATGTTATATCAAGGACACCTACTCAAGTAGCCAGCCATGCTCAGAAATACTTCATTAGGCAAAGCAATGTGTCTAGGCGAAAAAGACGATCCAGCTTGTTTGATATTGCTGCAGATGAACCAGCCGACATGCCCATGGTACCCCAAGACCTCCATTCAGCTAATCAGCCAACTGCTGAAGCAGAATGCAATAACCCTTTGCCTGATCCTCCAGCCATTGATGAAGAATGTGACTCCATGGACTCCCCTAATTCAAATGATGGTGATTCTGCCCCTTTGAAACCAGATAGCACACAGTCACAAACACAATCACCATACCCAGTGGTATATCCCGCATACTTCTCCCCGGTCTTCCCTTTCCCAATGCCGTATTGGTCAGGATATGTGCCAGAGCCCAGTAAGAAGGAGGAGACACATGAGGTGCTGAAACCTACTGCAGTGCATTCTAAGAGCCCAATCAATGTTGATGAACTGGTGGGTATGTCAAAACTGAGTTTAGGAGACTCTATTGGTGACTCTGGACCTTCCTCTCTGTCCCTGAAACTCCTTCAAGGACCCGCGAGACAGTCGGCTTTTCATGCAACCCCCGGCATGTGGGAATTCTGA 984 0.5 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYAGSSSGPHQTGCNTPGSPGETPDHGAVADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKRGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIAADEPADMPMVPQDLHSANQPTAEAECNNPLPDPPAIDEECDSMDSPNSNDGDSAPLKPDSTQSQTQSPYPVVYPAYFSPVFPFPMPYWSGYVPEPSKKEETHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLLQGPARQSAFHATPGMWEF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0325 327 MobiDBLite consensus disorder prediction 209 230 - -
Lele54g0325 327 PANTHER TRANSCRIPTION FACTOR KUA1 3 276 - -
Lele54g0325 327 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Lele54g0325 327 MobiDBLite consensus disorder prediction 80 99 - -
Lele54g0325 327 CDD SANT 99 144 IPR001005 -
Lele54g0325 327 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Lele54g0325 327 MobiDBLite consensus disorder prediction 41 72 - -
Lele54g0325 327 SMART sant 96 146 IPR001005 -
Lele54g0325 327 Gene3D - 98 150 - -
Lele54g0325 327 MobiDBLite consensus disorder prediction 41 64 - -
Lele54g0325 327 FunFam transcription factor MYB1R1 98 149 - -
Lele54g0325 327 MobiDBLite consensus disorder prediction 182 230 - -
Lele54g0325 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Lele54g0325 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Lele54g0325 327 MobiDBLite consensus disorder prediction 1 21 - -
Lele54g0325 327 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0325 Lele-ChrLele54 2818542 2821532 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele54g0325 Myb_DNA-binding 1.5e-09 CL0123