Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0319 ATGAAGGGAGAAGAGGTGAAATGTGGAGAAGAAGAGAAATTACATTTAGGGGATGGCGAAATCGAAAGAACAAGCTTAGTTGTGAATGATGCGAAAAGTGTACTTGTTGGAGCAGGGGCTCGTGCTCTCTTCTATCCCACTCTGCTTTACAATGTGCTTAGGAATAGGTTTCAGGCTGAGTTTCGATGGTGGGATAAAGTTGATAAGTTCATATTATTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCACTTAAAGAAGCTTGGCGTTTGTGGAGTAATCACATTGAATGAGTCATATGAGACTCTGGTTCCAACCACACTATATCATGCTTATGGAATTGATCATTTGGTTATTCCTACAAGAGATTATTGTTTTGCACCATCATTACGTGACATATGCTGTGCTGTGGACTTCCTACATGAAAATGCATTGTGCGGGAGAAGTACGTATGTGCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTATTGTTATCTGCTACTTGGTACATTACAAGATGATGACGCCTGATGCTGCATATGATTATGTGAAGTCAATTCGGCCAAGAGTCCTACTAGCATCTTCTCAGCGGCAAGCTGTTGAGGAATACTACCAGCTCATGGTGAAGAGGACAATTTTGTATGCTCCCACAGCCAAGTTAGTGGTGAGGGCATCAGAGAAGTTGGTAAAATTTGATGATGATGAGTCTGTAGTTGTGACAGAAACAGATCTTGAAGGGTATGACCCAAGTAGTATCCTATCAGGTGGTGTGGGGAGGGAGATATTGGCACATGTAAGCTTTGTGTTTCATGTTAGAGTTGCTGGCCAAGCTGCCCTAGCAAGAATGTCATGGCTCAGCCTGCCATGTTGA 873 0.4341 MKGEEVKCGEEEKLHLGDGEIERTSLVVNDAKSVLVGAGARALFYPTLLYNVLRNRFQAEFRWWDKVDKFILLGAVPFPIDVPHLKKLGVCGVITLNESYETLVPTTLYHAYGIDHLVIPTRDYCFAPSLRDICCAVDFLHENALCGRSTYVHCKAGRGRSTTIVICYLVHYKMMTPDAAYDYVKSIRPRVLLASSQRQAVEEYYQLMVKRTILYAPTAKLVVRASEKLVKFDDDESVVVTETDLEGYDPSSILSGGVGREILAHVSFVFHVRVAGQAALARMSWLSLPC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0319 290 FunFam Dual specificity phosphatase domain protein 63 210 - -
Lele54g0319 290 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 210 IPR020422 GO:0006470|GO:0008138
Lele54g0319 290 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 210 IPR029021 -
Lele54g0319 290 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 15 284 - -
Lele54g0319 290 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 131 199 IPR000387 GO:0016311|GO:0016791
Lele54g0319 290 CDD PTPMT1 63 206 IPR044596 GO:0004721
Lele54g0319 290 Gene3D Protein tyrosine phosphatase superfamily 63 213 IPR029021 -
Lele54g0319 290 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
Lele54g0319 290 SMART dsp_5 66 207 IPR020422 GO:0006470|GO:0008138
Lele54g0319 290 Pfam Dual specificity phosphatase, catalytic domain 87 205 IPR000340 GO:0008138|GO:0016311
Lele54g0319 290 SMART ptp_7 105 216 IPR003595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0319 Lele-ChrLele54 2743962 2746679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0319 11 288 Protein tyrosine phosphatase (PTP) family AT2G35680 59.459 2.61e-113 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0319 54 2743962 2746679 Lele56g1117 56 14669982 14672815 hybridization