Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0315 ATGAACCCAATCTCCTATAAATACCCTCCTCTTGTTTCTCATCTAATTTCCAACTTCGAATTGTCAATTCCTTTCTTGATCTTTTCTCTCTTTCTTCTTTCTCTGTGTTTACAAACGACGCAGATGCCAGAATCACTCGCCGGAAGAAGATATTGCGGTGGCGATATGTACGGACATGCCTCTTACGGGTCGGATTTTGCCTTGTTGGAGTCGATTCGACTCCACTTGCTCGGTGACTTGGAGACTGCTTTTGCTGATTCGGATACTTCTTCGGGATCTGCTCCGGTTTACACTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGTTTGACGGACAATTGGGGCGAATTACCTCTCAAGGAGGACGATTCCGAAGACATGGTGCTCTACGGTGTCCTCCGTGATGCGGTTAACGTCGGGTGGGTTCCCTCCCTCGATGTCGGGTCGCCCGATAGCATTTCTTCTGGTTTCGTCCCGACCGTTACAGTGAAATCTGAGCCCGATGTGTTGCCTGTCTTGGATTCCCCTGCGGGCCCTCCTCCCGTCGTAAAGCAAGAGAAGGTGGCTGAGGAAGTCGTACCGGCCGCAGTTCCGTCGAAGGGGAAGCATTACCGAGGAGTAAGACAACGGCCGTGGGGGAAATTCGCCGCGGAGATCCGTGACCCGGCGAAGAACGGAGCTCGGGTTTGGCTCGGAACATTCGAGACAGCCGAAGACGCAGCTCTGGCTTACGATCGAGCGGCGTACAGGATGCGAGGCTCACGCGCTCTGCTGAATTTCCCGCTGAGAGTGAACTCGGGCGAACCCGACCCGGTTAGAGTGACATCGAAGAGGTCATCACCGGAGAGATCGTGGTCGAGCATGTCGTCGTCGTCGACGACGACGGAGAGCGGGGCGTCACCGAAGAGAAGGAAGAAGGTGGTGGTGGGGACAACAGGGGCAAAGGCGACAGGGCAAGTGGGGAGCCAAGTGGGAACGACGTCGTTATTGGTGAGCTAA 999 0.5495 MNPISYKYPPLVSHLISNFELSIPFLIFSLFLLSLCLQTTQMPESLAGRRYCGGDMYGHASYGSDFALLESIRLHLLGDLETAFADSDTSSGSAPVYTRSSSFSSLYPCLTDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDVGSPDSISSGFVPTVTVKSEPDVLPVLDSPAGPPPVVKQEKVAEEVVPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPERSWSSMSSSSTTTESGASPKRRKKVVVGTTGAKATGQVGSQVGTTSLLVS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0315 332 FunFam Ethylene-responsive transcription factor 2 202 262 - -
Lele54g0315 332 ProSiteProfiles AP2/ERF domain profile. 203 261 IPR001471 GO:0003700|GO:0006355
Lele54g0315 332 MobiDBLite consensus disorder prediction 315 332 - -
Lele54g0315 332 CDD AP2 202 261 IPR001471 GO:0003700|GO:0006355
Lele54g0315 332 MobiDBLite consensus disorder prediction 278 298 - -
Lele54g0315 332 PANTHER DNA-BINDING DOMAIN 189 296 IPR044808 GO:0003700|GO:0009873
Lele54g0315 332 SMART rav1_2 203 267 IPR001471 GO:0003700|GO:0006355
Lele54g0315 332 MobiDBLite consensus disorder prediction 265 332 - -
Lele54g0315 332 Gene3D AP2/ERF domain 202 264 IPR036955 GO:0003700|GO:0006355
Lele54g0315 332 PRINTS Ethylene responsive element binding protein signature 227 243 IPR001471 GO:0003700|GO:0006355
Lele54g0315 332 PRINTS Ethylene responsive element binding protein signature 204 215 IPR001471 GO:0003700|GO:0006355
Lele54g0315 332 SUPERFAMILY DNA-binding domain 203 263 IPR016177 GO:0003677
Lele54g0315 332 Pfam AP2 domain 203 253 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0315 Lele-ChrLele54 2699694 2700692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0315 64 310 AP2-EREBP Transcription Factor Family AT4G17500 57.031 2.05e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele54g0315 AP2 1.5e-14 CL0081