Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0309 ATGTCGTTGCAGATCAGTTCAGCTATTCCATTGTACAACGCTCGCGTGTTTCAGGTCAGACGTGCAAGCTTCCGATGCCAAGCTTCTCCGTTAAACCCTTCCACGAAAGCATCGGCGCCACCGGTTTCCACCGAGTCCACTCGCTTGCACCTCGCAAACCTCGACAAGCTCCTCCAGAAGCAATCGCCTCCTACTATCAACCAATTCGAACAACAACAACAACAACCCCCAAAGCCTCTCCAGAAGGAAACTGAAACCGAAAAGAGATCGAAGAACATAGTTGAAGGCCTGAGTTTAGCTAGGCTATGGCCAGAAATGAAGGCTACAGAAGAGATGTCTCCGAGGCATCTCAACCGCTTACAGCGTCTGTTATCAAAGACGATGGAATATTCCCCTCGGAACATTCTCGGGAGCCGGTGGAGGGAATATCACGGAAGTAACGATTGGAAAGGACTCCTAGATCCGCTTGACGAGAATCTCCGGCGAGAAGTTGTCCGATACGGCGAGTTCGTACAAGCCGCTTACCATTCGTTTAACACCGATCCCGCCATGTCACCGGAGGAGCCGCCCACGCCCCAGAGGGTCGTTTTGTCGGATAGGTCCTACAAAGTCACCAAGAGCCTCTATGCCACGTCGTCAATCGGGTTGCCCAAGTGGGTGGACGACGTGGCTCCGGATCTCGGATGGATGACCCAGCGATCGAGTTGGATCGGGTACGTCGCCGTTTGCGATGATAGGAGAGAGATCGCGAGGCTGGGACGGAGGGACATCGTGATATCTCTACGGGGGACAGCGACGTGCCTAGAATGGGCCGAGAATACCCGGGCCCAATTAACCGATGTGCTACCAAAGAGGGATGATGACTCAGCTCCGGCCCATGAAAAGCCCAAAGTGGAGTGTGGGTTCTTGAGCCTGTACAAGACCCCAGGGGCTCACGTGCCGAGCCTAGCCAAGTCTGTGATAGAAGAAGTGAAAAGGCTCATGGAAGTGTACAAAGGCGAGACACTCAGCATCACTGTAACCGGTCATAGCCTCGGCGCTGCGTTGGCGTTACTCGTGGCTGATGAGATCAGCACTTGCGGCGCTGACATGCCACCGGTGGCGGTAATCTCCTTCGGTGGGCCTCGAGTGGGAAATAAAGCCTTCAAAAATCGATTAGCGACTCAAAATGTAAAAGTACTAAGAATAGTGAACTCTCAGGATGTGATTACCAGGGTCCCGGGAATGTTCATGAGTGAAGAAGTTGAACAAAAGCTAAGCAGTTCCAGGTTAGGAGAAATGGTAGAGAACATGGGGTTTGGATATACGCACGTGGGAGTAGAGCTACGAGTAGATACGAAGATGTCGCCGTATCTGAAGCCGGATGCTGACATGGCATGTTGCCATGACCTAGAGGCTTATCTGCACTTGGTGGATGGGTATTTGGCATCAAATTGTCCGTTCAGATCAAATGCCAAGAGGAGCTTGCGAAGATTAATGCAAGATCAAACATCCAATATGAAGAAACTATATACTAGCAAGGCAAAAGCCTTGAGTGCAAGCCTTGTGAAACAAGGCTCTTTCTCTATGCCTAGTTCATCTTAA 1584 0.5126 MSLQISSAIPLYNARVFQVRRASFRCQASPLNPSTKASAPPVSTESTRLHLANLDKLLQKQSPPTINQFEQQQQQPPKPLQKETETEKRSKNIVEGLSLARLWPEMKATEEMSPRHLNRLQRLLSKTMEYSPRNILGSRWREYHGSNDWKGLLDPLDENLRREVVRYGEFVQAAYHSFNTDPAMSPEEPPTPQRVVLSDRSYKVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWIGYVAVCDDRREIARLGRRDIVISLRGTATCLEWAENTRAQLTDVLPKRDDDSAPAHEKPKVECGFLSLYKTPGAHVPSLAKSVIEEVKRLMEVYKGETLSITVTGHSLGAALALLVADEISTCGADMPPVAVISFGGPRVGNKAFKNRLATQNVKVLRIVNSQDVITRVPGMFMSEEVEQKLSSSRLGEMVENMGFGYTHVGVELRVDTKMSPYLKPDADMACCHDLEAYLHLVDGYLASNCPFRSNAKRSLRRLMQDQTSNMKKLYTSKAKALSASLVKQGSFSMPSSS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0309 527 Pfam Lipase (class 3) 258 409 IPR002921 GO:0006629
Lele54g0309 527 CDD Lipase_3 197 472 - -
Lele54g0309 527 SUPERFAMILY alpha/beta-Hydrolases 160 474 IPR029058 -
Lele54g0309 527 Gene3D alpha/beta hydrolase 139 522 IPR029058 -
Lele54g0309 527 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 46 509 - -
Lele54g0309 527 MobiDBLite consensus disorder prediction 67 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0309 Lele-ChrLele54 2632903 2634486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0309 13 527 Acyl Lipid Metabolism Gene Families AT4G16820 56.654 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0309 54 2632903 2634486 Lele49g0476 49 2841410 2843437 CCT
Lele54g0309 54 2632903 2634486 Lele50g0508 50 3020865 3025865 CCT
Lele54g0309 54 2632903 2634486 Lele51g0492 51 2888962 2896415 CCT
Lele54g0309 54 2632903 2634486 Lele52g0509 52 3092844 3097837 CCT
Lele54g0309 54 2632903 2634486 Lele55g1177 55 18403073 18404653 hybridization
Lele54g0309 54 2632903 2634486 Lele56g1127 56 14763932 14765512 hybridization