Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0302 ATGGGATCTCTTGTCGCCGTCCCAGTTCTTGACGCTCCGATCTCCTCCGAGTCCGAAATGGCCTGGCACTTTGCGTCTCTTCTTCTATCCCTCGGTCATCCAGCTCATCCCGCCGACCTCGCTTCTCGATGCACTTTTTTCACTGCTTCTCCTGAGCTAGTTGAGTTCCTCTGCTCGATCTCTGAATCTCCCATCTTGTTGACCTCCGATTTCTATGTTACTCTCTCTGCTGTTGCTATAGTCGCTGTTGGACGCTTCGTCTCGGTGACCGATTTTTTTGGTAGTTCTTTTATACCTAGATTTGGAATCAGAGTTTCCTCGACTGACGGTTGGGGGAATAGCTGTAGAAAACGGAAACGAATGTTTATTTTAGATTCCGATTTTCTTCCCGTGGCAAAAAGAGGGATAAATTATTATTCTGAACATGTAGATGAGTTGGAACCATCGAAGTTGCTTCCTCCGGAGAGAATCAGCGATGATTCTTCAAAGATTATTTTAAAGTCACATGGCAGTGTAAGCATTGAATTATTCGAAAGTCCAGATCAGTGCAAGGAAGTTAAAATGGAGGAGACTTCCGGAAGTAGGACAAATGTCAATGACGACTCATTAAAAGATCTTAAATCTACCGGTGTGCCTCCGTTGGTCGATGACGAGATTAATGACAATAAAGTAGCTCCGAACATTAGAATAGGTGATAACAAAGTATCCTTGGAATGCAAGCATACGTCGATGAGTTCCGATAGCATGAAACCTCTTCAAAACATTTTACAGCCATTAAATACTACTGCTTTAGAAATGCCGCCCAAAGGTATTCATGATGAAAAATGTGATGAAGTTAACCATTTGAATGGAAAGTCAATGGCTTTAGATATGAAAAGCATGGACTTTTCCACGGATCCCCTTTCTTTACAGAAGTTTCCTCAATCCTCTTTGAAGACGAATGCCACGCCCAGCGATGCAACTCTTCCTAATCTGCAAAACATGTCCAAACGTTTACCTAATGAAGAGAAACGGAACTTTAGTAGAGGTCAGGCATCAATGGGTAAGGGACAGAAAAAGAATTGCACTGCCACGCATATCAAGGAAAAAAGGGGGACTTCGATCTCAACGTGTCCTGAGGATCAAAAGGAGCGTAAAGAGCTTCCAACATTTGAATCGTACATTGTAGAAGAGGAAGAAGGCTCAGGTGCTTATGGCATTGTTTACAAGGCAAGGAGGAAGAATGATGGAGCCACGGTTGCCATTAAATGTCCTCATGCTAAAGCTCAAGGGCAATATGTTACTAATGAGCTGAAAGTGCTGGAGCGATTTGGAGGCAAAAACTTCATCATTAAATATGAAGGCAGCTTCAAGAATGGAAATTCTGATTGCTTTGTTCTAGAACATATTGAGCACGACAGGCCTGAGGTGTTAAGGAAAGAAATTGATTTTGTTCAACTCCGATGGTATGGTTACTGCATGTTCAGGGCTCTTGCAGCTCTTCACAAGCGGGGAGTAATACACAGAGATGTTAAACCTGGCAATTTCCTTTTCTCCCGTAAGCTTAAGAAAGGCTTCCTTATTGATTTTAATCTTGCAAAGGATCTGCATCAGAAGCCAGGGAATATCACTTCAACCAAATGCAGAAAGTTCCCAAATGTCAAGTTTTTGGAAACTGCCAATCAACAGACAACTTATGCCTCCGAGTCGATTTTAGATCCAAAAGACAACAGAAGAAGGACAGTGGTGCAGTCAAAGACTAAAAATGACCGAGGTAGTGGGCAGGTAATGAAAAGTCAAGGTGCAGACGGCTCAGGAGTAACTTCAGCAAAGGATGTGACCAGCACAAGAACATCACTTGAAAAGAGACTGAGTTTCGTAAAGCCAAGGAGGAAAGAGTTGATTAGCTTCTTGCAAGAGTTAGGTCCTAATCAAGAACCATCAAACACTCCCATGAGGAAGCGAGTTCCTGCTCCTCGTAATAAGATTAAGAGCGAGCATATCTACATCTCTCCCATGCCTTTGAATTCAATTGGCAATGATGCCACTGCTGCTGGATTTCTGAATAGGAAAGGGATTGGAAAGCAGATAAGAGAAGGTTCTTGTGTGGGAACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGATCACCTCATCAAGGTCCTAAGCTTGATGTCTGGTCTGCCGGTGTATCGTTGCTCTATCTCATAATCGGGAAAGTTCCTTTCACTGGTGATCCTGAACAGAACATAAAGGATATAGCTAAACTTAGAGGCAGTGAGGATCTATGGGAAGTTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGACTTGTACGTTAAACACGGTATGCCATCTTTGCGACTACGAGATTGGTGCTTAATGAACACAAAGAGACCAGAGTTCCTAGAAGTCATTCCCAGTTCACTTTTTGATCTTGTGGACAAGTGCCTGATGGTGAACCCTAGAGTGAGAATCAGTGCAGAGGAAGCTCTTCAGCATGAGGTTTTCGCTCCATGCCATGAAAGCCTGAGGAAGGAGAGGCAATTTGAATTGGCCCATTCTGTAATTTCCCCTCCCAGGTATTCTTTTGTTCATTACACTGCCACTTATAGTACAATGAATCACAATAATCTACCATTCCACCGACTTTTGCCTTTTGGTGTGGTTTCGTTTGAATTCTTCGGTTCCTTTCTTGTTTGCTCGTCAACGATTTCTATTGCTATTGCTAGTTTTTGCGATCTCTGTTCGACACCAATGGACGCATTCTCTTCTTTTTTCGATTCTCAATCGTCTCGCGGAAACCGCTGGAATTACAATACTCTCAAGAACCTCCGTGAGATTTCTCCGGTCGTCCAGAATCACATTAAACAGGTTTATCTTGCCTTATGCTGCGCTGTGGTTGCTGCGGCCCTTGGAGCTTACCTGCATATCCTCTGGAACATTGGCGGTTTTCTGACAACAGTCGCGTCCCTTGGGAGCATTGTTTGGTTACTGTCCACACCTACTTATGAAGAGAAAAAGAGGGTTGCCTTGTTGATGGCTTCCTCATTATTTCAGGGGGCCTCCATTGGACCTTTGATCGCTTTGGCTATCGAAGTTGATCCAAGCCTTATCTTCACTGCCTTTGTGGGAACTTCATTGGCCTTTGCTTCTTTCTCAGCAGCAGCTTTGGTAGCAAGGCGCAGAGAGTACCTCTATCTTGGTGGTTTGCTTTCTTCTGGATTGTCCATTCTTATGTGGTTGCACTTCGCTTCTTCCATCTTTGGGGGTGCGGCTGCGTTCTTCAAGTTTGAGCTATACTTTGGGCTTTTGGTGTTTGTGGGCTACGTTATATTTGACACGCAAGAAATAATTGAGAGAGCTCACTTGGGGGATCTGGACTATGTGAAGCATGCCTTGACCCTCTTTACTGATTTTGCTGCAATCTTTGTCCGTCTTCTCATAATTGTCTTGAAGAATTCAGCTGAGAAGAATGAGAAGAAAAAGAAGAGGAGGGATTGA 3489 0.4371 MGSLVAVPVLDAPISSESEMAWHFASLLLSLGHPAHPADLASRCTFFTASPELVEFLCSISESPILLTSDFYVTLSAVAIVAVGRFVSVTDFFGSSFIPRFGIRVSSTDGWGNSCRKRKRMFILDSDFLPVAKRGINYYSEHVDELEPSKLLPPERISDDSSKIILKSHGSVSIELFESPDQCKEVKMEETSGSRTNVNDDSLKDLKSTGVPPLVDDEINDNKVAPNIRIGDNKVSLECKHTSMSSDSMKPLQNILQPLNTTALEMPPKGIHDEKCDEVNHLNGKSMALDMKSMDFSTDPLSLQKFPQSSLKTNATPSDATLPNLQNMSKRLPNEEKRNFSRGQASMGKGQKKNCTATHIKEKRGTSISTCPEDQKERKELPTFESYIVEEEEGSGAYGIVYKARRKNDGATVAIKCPHAKAQGQYVTNELKVLERFGGKNFIIKYEGSFKNGNSDCFVLEHIEHDRPEVLRKEIDFVQLRWYGYCMFRALAALHKRGVIHRDVKPGNFLFSRKLKKGFLIDFNLAKDLHQKPGNITSTKCRKFPNVKFLETANQQTTYASESILDPKDNRRRTVVQSKTKNDRGSGQVMKSQGADGSGVTSAKDVTSTRTSLEKRLSFVKPRRKELISFLQELGPNQEPSNTPMRKRVPAPRNKIKSEHIYISPMPLNSIGNDATAAGFLNRKGIGKQIREGSCVGTKGFRAPEVLFRSPHQGPKLDVWSAGVSLLYLIIGKVPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPADLYVKHGMPSLRLRDWCLMNTKRPEFLEVIPSSLFDLVDKCLMVNPRVRISAEEALQHEVFAPCHESLRKERQFELAHSVISPPRYSFVHYTATYSTMNHNNLPFHRLLPFGVVSFEFFGSFLVCSSTISIAIASFCDLCSTPMDAFSSFFDSQSSRGNRWNYNTLKNLREISPVVQNHIKQVYLALCCAVVAAALGAYLHILWNIGGFLTTVASLGSIVWLLSTPTYEEKKRVALLMASSLFQGASIGPLIALAIEVDPSLIFTAFVGTSLAFASFSAAALVARRREYLYLGGLLSSGLSILMWLHFASSIFGGAAAFFKFELYFGLLVFVGYVIFDTQEIIERAHLGDLDYVKHALTLFTDFAAIFVRLLIIVLKNSAEKNEKKKKRRD 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0302 1162 MobiDBLite consensus disorder prediction 580 612 - -
Lele54g0302 1162 MobiDBLite consensus disorder prediction 308 330 - -
Lele54g0302 1162 MobiDBLite consensus disorder prediction 308 332 - -
Lele54g0302 1162 Gene3D Transferase(Phosphotransferase) domain 1 656 853 - -
Lele54g0302 1162 FunFam Probable serine/threonine-protein kinase DDB_G0291918 379 543 - -
Lele54g0302 1162 SUPERFAMILY Protein kinase-like (PK-like) 384 844 IPR011009 -
Lele54g0302 1162 FunFam Kinase like protein 668 843 - -
Lele54g0302 1162 MobiDBLite consensus disorder prediction 565 579 - -
Lele54g0302 1162 CDD BI-1 943 1151 - -
Lele54g0302 1162 Coils Coil 1147 1162 - -
Lele54g0302 1162 MobiDBLite consensus disorder prediction 187 219 - -
Lele54g0302 1162 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 342 848 - -
Lele54g0302 1162 MobiDBLite consensus disorder prediction 562 612 - -
Lele54g0302 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Lele54g0302 1162 ProSiteProfiles Protein kinase domain profile. 387 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0302 1162 Gene3D Transferase(Phosphotransferase) domain 1 359 549 - -
Lele54g0302 1162 SMART serkin_6 387 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0302 1162 Pfam Protein kinase domain 389 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0302 1162 Pfam Protein kinase domain 694 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0302 1162 Pfam Inhibitor of apoptosis-promoting Bax1 948 1145 IPR006214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0302 Lele-ChrLele54 2572672 2582841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0302 387 750 Core Cell Cycle Gene Families AT4G28980 25.199 3.34e-13 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lele54g0302 Bax1-I 2.2e-32 CL0453