Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0299 ATGTCATCCTGCTCGTCGGACAAGTCGGAGGTTTCTGACTTGAAGCCAGCGGCCAAGTCGTCGGAGCAGTCAGCCTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTACCTAAAAGAAAAAGGAAGCTTCGGAGATCTTAGTCTCGGAATGAAATGCAACATCAAAGGAACTGGGTCTCATGAGACGATGAAGAACCCTGTTCCGACCAAGACTCCTGTGAATCCCAGTGCGATGAATTCTGCGAGTAAGGAGACTAAATCTCAACAGTTGACAATCTTTTATGGGGGACAAGTTCTTGTGTTTGATGATTTTCCATCTGAGAAAGCAAAGGAGATCATGTCCCTTGCAAGCAAAGTAATCTACCAATTGCTAGAAAAGCGTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGGTAGGTTCTCTCAAACAAATTAA 438 0.4475 MSSCSSDKSEVSDLKPAAKSSEQSAFSQTCSLLSQYLKEKGSFGDLSLGMKCNIKGTGSHETMKNPVPTKTPVNPSAMNSASKETKSQQLTIFYGGQVLVFDDFPSEKAKEIMSLASKVIYQLLEKRHFIGSWRRERIGRFSQTN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0299 145 MobiDBLite consensus disorder prediction 58 84 - -
Lele54g0299 145 ProSiteProfiles Tify domain profile. 83 118 IPR010399 -
Lele54g0299 145 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 118 IPR040390 -
Lele54g0299 145 MobiDBLite consensus disorder prediction 57 84 - -
Lele54g0299 145 MobiDBLite consensus disorder prediction 1 25 - -
Lele54g0299 145 SMART tify_2 83 118 IPR010399 -
Lele54g0299 145 Pfam tify domain 86 117 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0299 Lele-ChrLele54 2535051 2536253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0299 20 118 Tify Gene Family AT1G74950 40.146 6.24e-24 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele54g0299 tify 1.1e-19 No_clan