Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0297 ATGACAAAATCACTGTCTTTCCCTTCGGAAGCGACACTTGCAGTCTTGTGCTTCTCTTGTCGCCTGTTGTATTGCGAAAGCCAGCCGGTTTTGGTCTTTGGGAGGGTGGACATGGAGGAAAGGTACGAGGCAGTGAAGGATCTTGGTTCTGGGAATTTCGGAGTGGCCAGGCTGGTCAGAGATAAGAAGACTAAAGAGCTCGTTGCTGTCAAATACATTGAAAGAGGGAAAAAGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTTTAAGGCATCCAAACATTATCAAGTTCAAAGAGGTTGTGCTGACCCCAACTCATTTGGCTATTGTCATGGAGTACGCTGCAGGTGGTGAACTCTTTGAGAAGATATGCAGTGCTGGTCGATTCAGTGAAGACGAGGCAAGATTTTTCTTCCAGCAGCTAATTTCTGGAGTTAGCTACTGTCATTCAATGGAGATCTGTCATAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGAAGTCCGAATCCTCGAGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCTTTACTTCATTCTCAACCGAAATCAACCGTTGGAACTCCGGCTTACATTGCTCCAGAGGTTCTGTCCCGAAAGGAGTACGATGGAAAGATTGCAGACGTATGGTCCTGTGGTGTGACTTTGTATGTCATGTTAGTTGGAGCATACCCATTTGAAGATCCCGAAGATCCTAGGAATTTCCGAAAGACAATTGAGAGAATAATGAGCGTACAGTACAGCATACCGGACTATGTACGGGTCTCTGCAGACTGCAGACACCTTCTTTCTCGTATATTTGTTGCCAATCCTGCAAAGAGGACAAGCATACCGGAGATAAAACAGCACCCATGGTTTCTGAAGAACTTGGCGAAGGAGAGGGCGAAAGGGAAGGAGGAAGCAGCGAAAGAGCAAGGAAGGCAGAGTGTGGAAGACATAATGAGGATAATACAAGAGGCAAGAACTACAACAGTGGGGCAAGTATCATCCAACGGTGGAGGCGTAGTTGGTGGAGGCTCATTGGACGGTGAGGATCTTCAGGCAGATGAGGAACTTGAAGTTGATGTTAGTGGTGACTATGCTCAGAACTAG 1128 0.4592 MTKSLSFPSEATLAVLCFSCRLLYCESQPVLVFGRVDMEERYEAVKDLGSGNFGVARLVRDKKTKELVAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVVLTPTHLAIVMEYAAGGELFEKICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIERIMSVQYSIPDYVRVSADCRHLLSRIFVANPAKRTSIPEIKQHPWFLKNLAKERAKGKEEAAKEQGRQSVEDIMRIIQEARTTTVGQVSSNGGGVVGGGSLDGEDLQADEELEVDVSGDYAQN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0297 375 SMART serkin_6 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0297 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele54g0297 375 Gene3D Phosphorylase Kinase; domain 1 28 117 - -
Lele54g0297 375 Pfam Protein kinase domain 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0297 375 MobiDBLite consensus disorder prediction 336 375 - -
Lele54g0297 375 PANTHER SERINE/THREONINE KINASE 40 320 - -
Lele54g0297 375 Coils Coil 299 319 - -
Lele54g0297 375 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Lele54g0297 375 FunFam Serine/threonine-protein kinase SRK2E 38 117 - -
Lele54g0297 375 Gene3D Transferase(Phosphotransferase) domain 1 118 306 - -
Lele54g0297 375 CDD STKc_SnRK2 41 297 - -
Lele54g0297 375 SUPERFAMILY Protein kinase-like (PK-like) 29 303 IPR011009 -
Lele54g0297 375 FunFam Serine/threonine-protein kinase SRK2E 118 306 - -
Lele54g0297 375 ProSiteProfiles Protein kinase domain profile. 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0297 Lele-ChrLele54 2523364 2526814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0297 41 302 CBL-interacting serine-threonine protein kinases AT5G25110 43.590 1.46e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele54g0297 Pkinase 3e-72 CL0016