Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0292 ATGAAACAACCCCACTCGTCTGCCGTCGCAACCCTCGACCAAAAGGCTCAATTCTGCTCCGTTGTCGCCGATTCAGTTGTCAGCGTCAGTTATCCCCGTCGCTGGTCCCCGGATATTTGCCTTGCTGCCCGTCTGCTATCACAACCCTTCACGTCTGTTTTCTTCCCTTCTCGGAGTTTCTGTCTCTACGTGTATCCTTTCATGCTCGGCGTTCAGAGTATGATATGGGCAAAGCAGATAAGTACCGTTTCAAGTGGTGCTAGGTGACTTTTAAGAGTTTTCTGTGTGACTATTCAAGAAGTTCTTGTTTTACTTTACGGCTTTTACCCGTTCGACTCCGCGAGAAACATCTTCAGATGTCATATGTACATATATCAGATCTATTTAATATTTATACGAACGAAGAGAACGAAGAAGGCAGGCATTGTTGGAAAGTATGGTACCAGGTATGGGGCTAGTCTTAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAACATAGTAAATATTTCTGTGAATTTTGTGGGAAGTATGCTGTGAAGAGGAAAGCTGTAGGAATATGGGGCTGCAAGGATTGTGGTAAAGTGAAAGCAGGTGGTGCTTACACATTGAATACTGCGAGTGCTGTGACTGTGAGGAGTACCATTCGTAGGTTGAGGGAACAAACTGAGAGTTGA 675 0.4489 MKQPHSSAVATLDQKAQFCSVVADSVVSVSYPRRWSPDICLAARLLSQPFTSVFFPSRSFCLYVYPFMLGVQSMIWAKQISTVSSGARXLLRVFCVTIQEVLVLLYGFYPFDSARNIFRCHMYIYQIYLIFIRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0292 224 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 136 204 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele54g0292 224 SUPERFAMILY Zn-binding ribosomal proteins 142 214 IPR011332 GO:0006412
Lele54g0292 224 Gene3D - 133 224 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lele54g0292 224 FunFam 60S ribosomal protein L37a 134 224 - -
Lele54g0292 224 TIGRFAM eL43_euk_arch: ribosomal protein eL43 135 223 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele54g0292 224 PANTHER ZGC:171772 132 223 - -
Lele54g0292 224 Pfam Ribosomal L37ae protein family 136 220 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0292 Lele-ChrLele54 2481865 2487339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0292 134 224 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 94.505 2.31e-58 177