Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0291 ATGAACTGTTTCTTCTTCAAAAAGAAATCTAATTGCAGGGGAGAGTCAAAATCGGCGCCGGAATTGCAAAATGAGAGGCAGAGGAACAACCCGGCGGTGAACCGGGTTTGCAAGTCGACGAGTTCGATACCGTCGCCGAGGAGCGTGACGGAGTTGTACAAAGAGAAAGCTAAAGAGAACAATTTCAGAGTTTTTAGTTTCCAAGAGCTTCTGGAAGCAACAAATGAATTCAATAGGAAGCTCAAGATTGGTGAAGGTGGCTTTGGTAGCGTGTATAAAGGTACGATTATGCCTCCCGGTGGACGAGGCGATCCAATCGTCGTCGCCATAAAAAAGCTCAACAAGCATGGATTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTGAATCATCCAAATCTGGTAAAACTTCTGGGATACTGCTCTGACGATGGAGAAAGAGGTATCCAACGGTTGTTGGTGTACGAGTATATGGCAAATAGAAGCCTAGAAAATCATCTTTTTAATCCTTCTATTCCTACCTTGCCTTGGAAAAAAAGATTGCAGATCATGATCGGTGCTGCACAAGGATTGTCTTATTTGCATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATTCGGATTTCCAGCCAAAGCTCTCAGACTTTGGTCTTGCAAGGGAAGGCCCCCAAGGCGATAATACTCACGTATCTACTTCGGTGGTTGGAACACAAGGGTATGCTGCCCCGGAGTATGTAGAAACAGGGCATCTCAAAGTTGAATGTGACATTTATAGTTTTGGAGTGGTACTGTATGAGATCATCACGGGGAGGCGAGCATTAGATAGAAACCGTCCGGCTGCAGAACAAAAACTTCTGAGTTGGGTTAAACAGTATTCTGCTGACACCGGCAGATTCAGCATGATCATCGACCCACGTCTCAGAAACCATTTTTCTCCAGGCGCAGTTCGCAAAGTTGCCAAGTTGGCCGATGCCTGTACGAGAAAGAATCCTCAAGAAAGGCCAACTATGGCTCAGATAGTGGAAAGCTTGACAGAAGCACTGCAGGTTTCAGAGACCTCCGATACTTCTCAGAGAGAAACTCCCGAATCATCATCTCGATCTTCTTTGGCTCGAAGAGGTAAATAA 1170 0.4487 MNCFFFKKKSNCRGESKSAPELQNERQRNNPAVNRVCKSTSSIPSPRSVTELYKEKAKENNFRVFSFQELLEATNEFNRKLKIGEGGFGSVYKGTIMPPGGRGDPIVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSDDGERGIQRLLVYEYMANRSLENHLFNPSIPTLPWKKRLQIMIGAAQGLSYLHEGLEFQVIYRDFKTSNVLLDSDFQPKLSDFGLAREGPQGDNTHVSTSVVGTQGYAAPEYVETGHLKVECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLSWVKQYSADTGRFSMIIDPRLRNHFSPGAVRKVAKLADACTRKNPQERPTMAQIVESLTEALQVSETSDTSQRETPESSSRSSLARRGK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0291 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 373 - -
Lele54g0291 389 PANTHER OS01G0588500 PROTEIN-RELATED 35 360 - -
Lele54g0291 389 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Lele54g0291 389 MobiDBLite consensus disorder prediction 362 389 - -
Lele54g0291 389 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Lele54g0291 389 Pfam Protein kinase domain 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0291 389 CDD STKc_IRAK 83 360 - -
Lele54g0291 389 MobiDBLite consensus disorder prediction 362 383 - -
Lele54g0291 389 MobiDBLite consensus disorder prediction 14 44 - -
Lele54g0291 389 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Lele54g0291 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Lele54g0291 389 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Lele54g0291 389 FunFam Serine/threonine-protein kinase BIK1 44 162 - -
Lele54g0291 389 MobiDBLite consensus disorder prediction 23 44 - -
Lele54g0291 389 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0291 Lele-ChrLele54 2468711 2470935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0291 1 358 Glycoside Hydrolase AT3G07070 42.896 2.42e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele54g0291 Pkinase 1.3e-46 CL0016