Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0284 ATGCAAAAGGTCGCCTCCGACTCTGCTTTCGAGGAATCATGGAAGAAAGCCATTCCCAACATGGACCGTCCCAAGACTCCCTCCCATTTCATGCACTCTCGTCCTCCCGCTCCTTCTTCTATTCCCTCCAAAATCACTATCAATTTCGTTCTTCCCTACGCATCTCAGCTCTCTTCCCATGAGGGATTGAGTTCAGAGGTTGACATGGTGGTTATACCAGCAACAACAGGTCAAATGGGTCTTTTGGCTGGCCATGTACCGACAATTGTAGAACTGAAACCAGGGATCTTGTCTGTGCATGAGGGAAATGAAGTTACAAAATATTTTGTGAGCATTGGATTTGCGTTCATCCATGCAAATTCAGTTGCAGATGTGATTGCTGTTGAGGCCGTTCCAATTGATCTCATTGACCAAAGCCTAGTCCAGAAGGGGCTTACTGAGTTCACCCAGAAGCTCGCCTCTGCTACCACTGACTGA 477 0.4738 MQKVASDSAFEESWKKAIPNMDRPKTPSHFMHSRPPAPSSIPSKITINFVLPYASQLSSHEGLSSEVDMVVIPATTGQMGLLAGHVPTIVELKPGILSVHEGNEVTKYFVSIGFAFIHANSVADVIAVEAVPIDLIDQSLVQKGLTEFTQKLASATTD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0284 158 CDD F1-ATPase_delta 63 158 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lele54g0284 158 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 11 158 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lele54g0284 158 Hamap ATP synthase epsilon chain [atpC]. 43 157 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lele54g0284 158 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 63 131 IPR036771 -
Lele54g0284 158 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 63 122 IPR020546 GO:0015986
Lele54g0284 158 Gene3D - 43 158 IPR036771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0284 Lele-ChrLele54 2398904 2400302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0284 7 158 Primary Pumps ATPases AT5G47030 71.053 4.42e-76 224