Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0267 ATGGGTGAGATTGTGGAGGAGTTGAATCCCCTTGTTGGAGGTAACGATGGGCATGAATTCGATAATATTAGTAAGGTGGAGATCGTCCTCAAAACCATTGGCCCTGCTCGCCCTTCTCGTCTTCTTGTTCCATCTTCCATCAAGGTTCGTGATTTGAGAGGATTAATTGCCAGCAATGGTCGTTTACCGATTGATAATTTGAGTCTTATTCTGCGCGGAAATGTATTATGTGATATGAAAAATGGAGATGACGTGTACATTCAACTCAATAACGGAGATTCTCTGATTGTTGCTGTCAAACCAAAGCCACCAGTTCGTGATGGATATGATGACGACGACGATGACGATCTGAATTTTAAGCTTCCCCGTTCATCAAGTTGGTGGAAGAAGCGGCTTTACTCTTTTCTACATGATAACTTGAAGCTTCCAGATATCCTTTTGATGTTTATATTCTCTCTGAGCTTGAAAGCATGGGCTCTCACATTTATGTGGTTTATCCTGGCACCCGTTGCCCATAAATGGGATCTCGGACCCCTATATATACTTGCTACAGGTTTTTGTCTAATTCTCTTTAATCTTGGAAAGCGCCAAGCTGGTGACGTCAGTGCATATTCTATCTTCAATGAAGATTTTAGAGAGCTTCCAGGGACCCTTAATGCGGATCGTCTTGACAGAGATGTAAGAGCAGGACAGTTTTAA 699 0.4235 MGEIVEELNPLVGGNDGHEFDNISKVEIVLKTIGPARPSRLLVPSSIKVRDLRGLIASNGRLPIDNLSLILRGNVLCDMKNGDDVYIQLNNGDSLIVAVKPKPPVRDGYDDDDDDDLNFKLPRSSSWWKKRLYSFLHDNLKLPDILLMFIFSLSLKAWALTFMWFILAPVAHKWDLGPLYILATGFCLILFNLGKRQAGDVSAYSIFNEDFRELPGTLNADRLDRDVRAGQF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0267 232 PANTHER UNCHARACTERIZED 24 232 IPR039159 -
Lele54g0267 232 Pfam Uncharacterized conserved domain (SAYSvFN) 161 226 IPR019387 -
Lele54g0267 232 ProSiteProfiles Ubiquitin domain profile. 26 88 IPR000626 GO:0005515
Lele54g0267 232 SUPERFAMILY Ubiquitin-like 28 105 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0267 Lele-ChrLele54 2251463 2254345 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0267 54 2251463 2254345 Lele49g0416 49 2415567 2418667 CCT
Lele54g0267 54 2251463 2254345 Lele50g0445 50 2545717 2548717 CCT
Lele54g0267 54 2251463 2254345 Lele51g0427 51 2462470 2467478 CCT
Lele54g0267 54 2251463 2254345 Lele52g0443 52 2622005 2625353 CCT
Lele54g0267 54 2251463 2254345 Lele55g1223 55 18820784 18824421 hybridization
Lele54g0267 54 2251463 2254345 Lele56g1170 56 15172523 15185089 hybridization