Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0266 ATGGGACGTGGATTTTCCAAACTCTGTTCCTGCTTTGAACCGGTAAACCGGACGGCGACGACGAACCAACCGGATCAGCAGCAGGACGGGATTTCTGCCCCGACTGAGCATTTGGACGGAACTCTAGGCCACTCCTTCCGATATGTTAGATCTTCACCTCGGTTGCTTTCACCCGCTCACTCCGATCGCTTCGTCTCTCCTCCTTCTAACTCCCTCCGCTTCTTTCCCACCGGCGAGCCCATTATTGCAGCCCGACCCGATTATCCGGAAACTGGGTTCAGGGCCATTTCCGGAGCTTCGGGGAGTGCCAACAATTTGACTCTGAAACCTGTTCTCCAGATGGAAGATATCCACGATGAAGCCAATGATGATACCGCTCCTGAAGGTGGCGTGAGGGAAAGTAATGTGAATGGGTTCGAAAGCACATCTTCGTTTAGAGCTCTTCCCCTTCAGCCGGCACCGAGAGGGGAAGCTCACTTTCTCTCTGGTCCAATTGAGCGTAGTGCCTGCTCTGGGACTCTCGAGGCAAACAACGCCTCCACAGAAAGTGGAAGCGAAGTCCCTTTTTGGGCTCCTCTGGGCGGCTTTTATACCATAAAGAAGCGGAAGAGCGCGTTTTCACGGTTGCGTAAGGCATTTCATCGGGCCATTTGGGAGAAGAAGCAGCCAGGGGTGGCGCCGGTGTCGAATTTCATGGGCAGAAAGGAAGTTCCGTCGAACGAAGATAAGCCGGAGATGAAAAATGAGAGCCATGTACAGTGGGCGCTTGGGAAAGCAGGAGAGGATCGGGTACAAGTGGTTGTATCGGAAGAACACGGCCGGCTCTTCGTCGCGATTTACGACGGGTTCAATGGCCCTGAAGCGCCGGAATTCCTAAGGCGCCATCTTTATCGTGCTGTTGACAATGAACTAAAAGGTTTGTTCTGGGAAGAAGTTGAAGAAGACACAGAGGAAACTGAAACTGAAACCGTAATGGGAAGAAAGTCCCTGGAAGAGATCAAAACAGAGGATGAAATTTCAGTATGTTTAGAAGATAAGAATCCTCAGATGTTTCAAGCTGAAGGAACTAAAAGTAGGCGACGCAGGCTATGGGAATTTCTTGCAGAGGAAGACGATCGTGCAGATGGTATTGATCTTTCAGGCTCAGAAAGATTTGAATTTTTCGTCCATGACGAAATCAACGCAGGATCAGCAGTTAGCAGACGGTGGCTATTATCAAAACATAAGAGGGTCCACGGTGGTGGTAAGTTGTCATCACCTTCGACAGAATATCATAAAGAGAAGGTTGACGCAGAAAAAGACAAGTCTTTTTGTGGAAGAAGGGAGAGAAAGGTGGGCCCCGTGGATCATGATTCAGTGTTGAGGGCATTGTCTCGGGCTCTGGAAACCACCGAAGCTGCATATTTGGAGATGACAGACAAGCTTCTTGATTCAAACCCAGAACTTGCATTAATGGGGTCGTGTGTTTTAGTTGTTTTGATAAGGGACGAGGATGTTTACGTGATGAGCGTGGGAGATAGCAGAGCCATTGTTGCACAATATAAGCCCAAAGGGTTGGAATCTAAAGAGAGCATAGTTGAGGAATTCTTAGATAGAGATGAAAGCGCAATCAAGTTGGAGAATGAGGATTCTCGTCAAGAAATGAGGTTAGTTGCATTGCAGCTTTCCACCGACCATAGTACCAGCATTGAAGAGTTACTTGATGGGATAATTTGCATGGTGATGCAGCCAAAGTTGAATGATGCAGTGCTGGAAATGTTTCGTAATGATTATATAGGCACTGGTCCATATATTTCCTGCTCTCCTTCACTCTACCATCACAGATTAAGCCACAGAGACTATCAGTTCTTGATCCTCTCATCTGATGGCTTATATCAATATTTAACTAATCAAGAAGTGGTGTCTCAAGTTAAGAACTTTATGGACAAGTTCCCAGATGGAGATCCTGCCCAACATTTAATAGAGCAGCTACTTCTCCGTGCCGCCAACAAAGCTGGTCATATACCTTTAATGTTGAGTGTTGCAGGAATGGATGTGCACGAGTTGCTCGATATTCCTCAAGGAGATAGAAGGAAGTACCATGATGATGTAACTGTCATGGTCATCTCACTTGAAGGAAGAATGTGGAAATCAACGGGCAAGGTCAAGTTAATTTTGAAAAATAAAGGTCCATTTTACCCAAATATAGATATTAGAAATGCTTTCTTGAGCTTCAAGAGAAGCACCCCTTATAACTTATTCGGCTGGAACTTTGGCAAGAACAAGCCTGACGACAAACCTCAGATTAAGTATCACGACATTGATCTCACTTTCCCACCTTCTCTTCTCAATAGAACCTTCTTGAAGGGTCCTCTCTCTCTCTCTCTGTTCCTTTCTCCTGACCTTCAGAATTCTGTGACTATTGATCAGGAAAGGAACTCAAATGCTGCTATAGAGCCACAATCGATGGTTTTAGCGCGACGAAATTTCATGAAGGCTGCGATTTCAAGGGGCCATGCGTGA 2502 0.4644 MGRGFSKLCSCFEPVNRTATTNQPDQQQDGISAPTEHLDGTLGHSFRYVRSSPRLLSPAHSDRFVSPPSNSLRFFPTGEPIIAARPDYPETGFRAISGASGSANNLTLKPVLQMEDIHDEANDDTAPEGGVRESNVNGFESTSSFRALPLQPAPRGEAHFLSGPIERSACSGTLEANNASTESGSEVPFWAPLGGFYTIKKRKSAFSRLRKAFHRAIWEKKQPGVAPVSNFMGRKEVPSNEDKPEMKNESHVQWALGKAGEDRVQVVVSEEHGRLFVAIYDGFNGPEAPEFLRRHLYRAVDNELKGLFWEEVEEDTEETETETVMGRKSLEEIKTEDEISVCLEDKNPQMFQAEGTKSRRRRLWEFLAEEDDRADGIDLSGSERFEFFVHDEINAGSAVSRRWLLSKHKRVHGGGKLSSPSTEYHKEKVDAEKDKSFCGRRERKVGPVDHDSVLRALSRALETTEAAYLEMTDKLLDSNPELALMGSCVLVVLIRDEDVYVMSVGDSRAIVAQYKPKGLESKESIVEEFLDRDESAIKLENEDSRQEMRLVALQLSTDHSTSIEELLDGIICMVMQPKLNDAVLEMFRNDYIGTGPYISCSPSLYHHRLSHRDYQFLILSSDGLYQYLTNQEVVSQVKNFMDKFPDGDPAQHLIEQLLLRAANKAGHIPLMLSVAGMDVHELLDIPQGDRRKYHDDVTVMVISLEGRMWKSTGKVKLILKNKGPFYPNIDIRNAFLSFKRSTPYNLFGWNFGKNKPDDKPQIKYHDIDLTFPPSLLNRTFLKGPLSLSLFLSPDLQNSVTIDQERNSNAAIEPQSMVLARRNFMKAAISRGHA 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0266 833 Gene3D - 231 714 IPR036457 -
Lele54g0266 833 CDD PP2Cc 440 704 IPR001932 -
Lele54g0266 833 MobiDBLite consensus disorder prediction 17 39 - -
Lele54g0266 833 MobiDBLite consensus disorder prediction 17 34 - -
Lele54g0266 833 ProSiteProfiles PPM-type phosphatase domain profile. 246 704 IPR001932 -
Lele54g0266 833 Pfam Protein phosphatase 2C 431 515 IPR001932 -
Lele54g0266 833 Pfam Protein phosphatase 2C 595 649 IPR001932 -
Lele54g0266 833 PANTHER PROTEIN PHOSPHATASE 2C 241 703 IPR015655 GO:0004722|GO:0006470
Lele54g0266 833 SUPERFAMILY PP2C-like 257 705 IPR036457 -
Lele54g0266 833 SMART PP2C_4 245 702 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0266 Lele-ChrLele54 2241345 2245876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0266 1 714 PP2C-type Phosphatase Gene Family AT2G35350 49.007 0.0 590